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9EEV

Crystal structure of the SARS-CoV-2 Omicron nsp5 main protease (Mpro) E166V mutant in complex with inhibitor Nirmatrelvir (PF-07321332)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
3C-like proteinase nsp5polymer30633795.61UniProt (P0DTD1)Severe acute respiratory syndrome coronavirus 23CL-PRO,3CLp,Main protease,Mpro,Non-structural protein 5,nsp5,SARS coronavirus main proteinase
2B
(A)
(1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamidenon-polymer501.51Chemie (4WI)
Sequence modifications
A: 1 - 306 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Val 166Glu 3429engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight33795.6
Non-Polymers*Number of molecules1
Total formula weight501.5
All*Total formula weight34297.1
*Water molecules are not included.

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PDB entries from 2025-06-18

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