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9EC4

Structure of the Bacillus subtilis yjdF riboswitch aptamer domain in complex with chelerythrine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(M, A)
RNA (81-MER)polymer8126212.62synthetic construct
2C, O
(M, A)
1,2-dimethoxy-12-methyl[1,3]benzodioxolo[5,6-c]phenanthridin-12-iumnon-polymer348.42Chemie (CTI)
3D, P, Q
(M, A)
BARIUM IONnon-polymer137.33Chemie (BA)
4E, F, G, R, S
(M, A)
POTASSIUM IONnon-polymer39.15Chemie (K)
5H, I, J, K, L...
(M, A)
MAGNESIUM IONnon-polymer24.314Chemie (MG)
6AA, BA
(M, A)
waterwater18.088Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight52425.2
Non-Polymers*Number of molecules24
Total formula weight1644.5
All*Total formula weight54069.6
*Water molecules are not included.

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PDB entries from 2025-11-19

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