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9E9I

Crystal Structure of human KRAS G12C covalently bound to nopinone-derived naphthol compound 21

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Isoform 2B of GTPase KRaspolymer18421123.91UniProt (P01116)
Pfam (PF00071)
Homo sapiens (human)K-Ras 2,Ki-Ras,c-K-ras,c-Ki-ras
2B
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
3C
(A)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
4D
(A)
1-{6-[(4P,6R,8R)-3-fluoro-4-(3-hydroxynaphthalen-1-yl)-7,7-dimethyl-5,6,7,8-tetrahydro-6,8-methanoquinolin-2-yl]-2,6-diazaspiro[3.4]octan-2-yl}propan-1-onenon-polymer499.61Chemie (A1BH5)
5E, F, G
(A)
1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
6H
(A)
waterwater18.0182Chemie (HOH)
Sequence modifications
A: 1 - 169 (UniProt: P01116)
PDBExternal DatabaseDetails
Met -14-initiating methionine
Lys -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
His -9-expression tag
His -8-expression tag
His -7-expression tag
His -6-expression tag
Leu -5-expression tag
Val -4-expression tag
Pro -3-expression tag
Arg -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Cys 12Gly 12variant
Ala 118Cys 118engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight21123.9
Non-Polymers*Number of molecules6
Total formula weight1153.3
All*Total formula weight22277.2
*Water molecules are not included.

238582

PDB entries from 2025-07-09

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