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9E9B

Crystal structure of L. monocytogenes MenD with Mg2+ and ThDP bound

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthasepolymer58364929.51UniProt (A0A0H3GD77)
Pfam (PF02776)
Pfam (PF16582)
Pfam (PF02775)
Listeria monocytogenes 10403SSEPHCHC synthase,Menaquinone biosynthesis protein MenD
2B
(A)
THIAMINE DIPHOSPHATEnon-polymer425.31Chemie (TPP)
3C
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
4D
(A)
waterwater18.066Chemie (HOH)
Sequence modifications
A: 1 - 580 (UniProt: A0A0H3GD77)
PDBExternal DatabaseDetails
Gly -2-expression tag
Ala -1-expression tag
Met 0-expression tag
Val 1Met 1engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight64929.5
Non-Polymers*Number of molecules2
Total formula weight449.6
All*Total formula weight65379.1
*Water molecules are not included.

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PDB entries from 2025-10-29

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