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9E49

Cryo-EM structure of a di-nucleosome with an eight base-pair linker

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E, I, M
(A, E, M, Q)
Histone H3.2polymer13515303.94UniProt (Q71DI3)
Pfam (PF00125)
Homo sapiens (human)H3-clustered histone 13,H3-clustered histone 14,H3-clustered histone 15,Histone H3/m,Histone H3/o
2B, F, J, N
(B, F, N, R)
Histone H4polymer10311394.44UniProt (P62805)
Pfam (PF15511)
Homo sapiens (human)
3C, G, K, O
(C, G, O, S)
Histone H2Apolymer12913978.24Homo sapiens
4D, H, L, P
(D, H, P, T)
Histone H2Bpolymer12313655.94UniProt (A0A1B8Y854)Homo sapiens (human)
5Q
(I)
DNA (314-MER)polymer31497459.81Homo sapiens
6R
(J)
DNA (314-MER)polymer31496494.21Homo sapiens
Sequence modifications
A, E, M, Q: 1 - 135 (UniProt: Q71DI3)
PDBExternal DatabaseDetails
Ala 102Gly 103conflict
D, H, P, T: 1 - 122 (UniProt: A0A1B8Y854)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains18
Total formula weight411284.3
All*Total formula weight411284.3
*Water molecules are not included.

249697

PDB entries from 2026-02-25

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