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9E3S

Tricomplex of RMC-9945, KRAS G12N, and CypA

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Isoform 2B of GTPase KRaspolymer17019415.92UniProt (P01116)
Pfam (PF00071)
Homo sapiens (human)K-Ras 2,Ki-Ras,c-K-ras,c-Ki-ras
2C, D
(C, D)
Peptidyl-prolyl cis-trans isomerase Apolymer16618123.62UniProt (P62937)
Pfam (PF00160)
Homo sapiens (human)PPIase A,Cyclophilin A,Cyclosporin A-binding protein,Rotamase A
3E, I
(A, B)
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERnon-polymer522.22Chemie (GNP)
4F, J
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5G, K
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
6H, L
(A, B)
(2R)-2-{(5S)-7-[(2R,3R)-3-cyclopropyl-1-methylaziridine-2-carbonyl]-2,7-diazaspiro[4.4]nonan-2-yl}-N-[(1P,7S,9S,13S,20M)-20-{5-(4-cyclopropylpiperazin-1-yl)-2-[(1R)-1-methoxyethyl]pyridin-3-yl}-17,17-dimethyl-8,14-dioxo-21-(2,2,2-trifluoroethyl)-15-oxa-4-thia-9,21,27,28-tetraazapentacyclo[17.5.2.1~2,5~.1~9,13~.0~22,26~]octacosa-1(24),2,5(28),19,22,25-hexaen-7-yl]-3-methylbutanamide (non-preferred name)non-polymer1140.42Chemie (A1BEA)
7M
(D)
GLYCEROLnon-polymer92.11Chemie (GOL)
8N, O, P, Q
(A, B, C, D)
waterwater18.0986Chemie (HOH)
Sequence modifications
A, B: 1 - 169 (UniProt: P01116)
PDBExternal DatabaseDetails
Ser 0-expression tag
Asn 12Gly 12engineered mutation
C, D: 1 - 165 (UniProt: P62937)
PDBExternal DatabaseDetails
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight75078.9
Non-Polymers*Number of molecules9
Total formula weight3536.8
All*Total formula weight78615.8
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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