9DXX
Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with D-peptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Hemagglutinin HA1 chain | polymer | 328 | 36804.5 | 1 | UniProt (P03452) Pfam (PF00509) | Influenza A virus (A/Puerto Rico/8/1934(H1N1)) | |
| 2 | B (B) | Hemagglutinin HA2 chain | polymer | 176 | 20138.4 | 1 | UniProt (P03452) Pfam (PF00509) | Influenza A virus (A/Puerto Rico/8/1934(H1N1)) | |
| 3 | C (E) | D-peptide | polymer | 31 | 3465.1 | 1 | Phage display vector pdvec0 | ||
| 4 | D (L) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1203.1 | 1 | In PDB GlyTouCan (G11460AB) | |||
| 5 | E, F (C, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 6 | G (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 7 | H (B) | 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL | non-polymer | 164.2 | 1 | Chemie (TOE) | |||
| 8 | I (E) | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
| 9 | J, K, L (A, B, E) | water | water | 18.0 | 187 | Chemie (HOH) |
Sequence modifications
A: 11 - 329 (UniProt: P03452)
| PDB | External Database | Details |
|---|---|---|
| Pro 9 | - | expression tag |
| Gly 10 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 60407.9 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 2051.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 424.5 | |
| All* | Total formula weight | 62884.4 |
