9DN2
TJ5-1 Fab in complex with NG2 COBRA hemagglutinin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, H, I (A, B, C) | Hemagglutinin | polymer | 573 | 64499.4 | 3 | UniProt (A0A2P1ADT1) Pfam (PF00509) | Influenza A virus | |
| 2 | B, C, D (H, I, J) | TJ5-1 heavy chain Fab fragment | polymer | 118 | 12931.5 | 3 | Homo sapiens | ||
| 3 | E, F, G (L, M, N) | TJ5-1 light chain Fab fragment | polymer | 111 | 11667.7 | 3 | Homo sapiens | ||
| 4 | J, K, L, N, O... (D, E, F, K, O...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 12 | In PDB GlyTouCan (G42666HT) | |||
| 5 | M, R, W (G, R, W) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 3 | In PDB GlyTouCan (G15407YE) | |||
| 6 | AA, BA, CA, DA, EA... (A, B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 15 | Chemie (NAG) |
Sequence modifications
A, B, C: -15 - 506 (UniProt: A0A2P1ADT1)
| PDB | External Database | Details |
|---|---|---|
| Gly 142 | Arg 158 | conflict |
| Ser 144 | Lys 160 | conflict |
| Gln 311 | His 327 | conflict |
| Gly 507 | - | expression tag |
| Tyr 508 | - | expression tag |
| Ile 509 | - | expression tag |
| Pro 510 | - | expression tag |
| Glu 511 | - | expression tag |
| Ala 512 | - | expression tag |
| Pro 513 | - | expression tag |
| Arg 514 | - | expression tag |
| Asp 515 | - | expression tag |
| Gly 516 | - | expression tag |
| Gln 517 | - | expression tag |
| Ala 518 | - | expression tag |
| Tyr 519 | - | expression tag |
| Val 520 | - | expression tag |
| Arg 521 | - | expression tag |
| Lys 522 | - | expression tag |
| Asp 523 | - | expression tag |
| Gly 524 | - | expression tag |
| Glu 525 | - | expression tag |
| Trp 526 | - | expression tag |
| Val 527 | - | expression tag |
| Leu 528 | - | expression tag |
| Leu 529 | - | expression tag |
| Ser 530 | - | expression tag |
| Thr 531 | - | expression tag |
| Phe 532 | - | expression tag |
| Leu 533 | - | expression tag |
| Gly 534 | - | expression tag |
| Ser 535 | - | expression tag |
| Gly 536 | - | expression tag |
| Leu 537 | - | expression tag |
| Asn 538 | - | expression tag |
| Asp 539 | - | expression tag |
| Ile 540 | - | expression tag |
| Phe 541 | - | expression tag |
| Glu 542 | - | expression tag |
| Ala 543 | - | expression tag |
| Gln 544 | - | expression tag |
| Lys 545 | - | expression tag |
| Ile 546 | - | expression tag |
| Glu 547 | - | expression tag |
| Trp 548 | - | expression tag |
| His 549 | - | expression tag |
| Glu 550 | - | expression tag |
| Gly 551 | - | expression tag |
| His 552 | - | expression tag |
| His 553 | - | expression tag |
| His 554 | - | expression tag |
| His 555 | - | expression tag |
| His 556 | - | expression tag |
| His 557 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 267296.0 | |
| Branched | Number of molecules | 15 |
| Total formula weight | 6852.4 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 3318.1 | |
| All* | Total formula weight | 277466.5 |
