9DM0
Cryo-EM structure of the SFV009 3G01 Fab in complex with A/California/04/2009
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (D) | Fab light chain | polymer | 108 | 11803.1 | 1 | Homo sapiens | ||
| 2 | B (C) | Fab heavy chain | polymer | 122 | 13490.0 | 1 | Homo sapiens | ||
| 3 | C, E, G (A, E, F) | Hemagglutinin | polymer | 324 | 35960.6 | 3 | UniProt (R9RVT8) Pfam (PF00509) UniProt (by SIFTS) (C3W5S1) | Influenza A virus (A/California/04/2009(H1N1)) | |
| 4 | D, F, H (B, G, I) | Hemagglutinin | polymer | 231 | 26516.3 | 3 | UniProt (A0A1D5AK66) | Influenza A virus (A/California/04/2009(H1N1)) | |
| 5 | I, J, K (S, T, U) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
| 6 | L, M, N, O, P... (A, B, E, G, F...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 15 | Chemie (NAG) |
Sequence modifications
A, E, F: 10 - 325 (UniProt: R9RVT8)
B, G, I: 9 - 171 (UniProt: A0A1D5AK66)
| PDB | External Database | Details |
|---|---|---|
| Gly 10 | Ala 17 | conflict |
| Ser 186 | Pro 200 | conflict |
| Thr 200 | Ala 214 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ile -3 | - | expression tag |
| Gln -2 | - | expression tag |
| Ser -1 | - | expression tag |
| Arg 0 | - | expression tag |
| Gly 1 | - | expression tag |
| Leu 2 | - | expression tag |
| Phe 3 | - | expression tag |
| Gly 4 | - | expression tag |
| Ala 5 | - | expression tag |
| Ile 6 | - | expression tag |
| Ala 7 | - | expression tag |
| Gly 8 | - | expression tag |
| Glu 172 | - | expression tag |
| Ile 173 | - | expression tag |
| Asp 174 | - | expression tag |
| Gly 175 | - | expression tag |
| Ser 176 | - | expression tag |
| Gly 177 | - | expression tag |
| Tyr 178 | - | expression tag |
| Ile 179 | - | expression tag |
| Pro 180 | - | expression tag |
| Glu 181 | - | expression tag |
| Ala 182 | - | expression tag |
| Pro 183 | - | expression tag |
| Arg 184 | - | expression tag |
| Asp 185 | - | expression tag |
| Gly 186 | - | expression tag |
| Gln 187 | - | expression tag |
| Ala 188 | - | expression tag |
| Tyr 189 | - | expression tag |
| Val 190 | - | expression tag |
| Arg 191 | - | expression tag |
| Lys 192 | - | expression tag |
| Asp 193 | - | expression tag |
| Gly 194 | - | expression tag |
| Glu 195 | - | expression tag |
| Trp 196 | - | expression tag |
| Val 197 | - | expression tag |
| Leu 198 | - | expression tag |
| Leu 199 | - | expression tag |
| Ser 200 | - | expression tag |
| Thr 201 | - | expression tag |
| Phe 202 | - | expression tag |
| Leu 203 | - | expression tag |
| Gly 204 | - | expression tag |
| Ser 205 | - | expression tag |
| Gly 206 | - | expression tag |
| Leu 207 | - | expression tag |
| Asn 208 | - | expression tag |
| Asp 209 | - | expression tag |
| Ile 210 | - | expression tag |
| Phe 211 | - | expression tag |
| Glu 212 | - | expression tag |
| Ala 213 | - | expression tag |
| Gln 214 | - | expression tag |
| Lys 215 | - | expression tag |
| Ile 216 | - | expression tag |
| Glu 217 | - | expression tag |
| Trp 218 | - | expression tag |
| His 219 | - | expression tag |
| Glu 220 | - | expression tag |
| Gly 221 | - | expression tag |
| His 222 | - | expression tag |
| His 223 | - | expression tag |
| His 224 | - | expression tag |
| His 225 | - | expression tag |
| His 226 | - | expression tag |
| His 227 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 212723.8 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 1273.2 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 3318.1 | |
| All* | Total formula weight | 217315.1 |
