9DIY
Local Cryo-EM structure of HCMV gH/UL116 interaction
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Envelope glycoprotein H | polymer | 680 | 77497.2 | 1 | UniProt (A8T7F0) Pfam (PF02489) Pfam (PF17488) UniProt (by SIFTS) (P12824) | Human betaherpesvirus 5 | UL75 |
| 2 | B (C) | UL116 | polymer | 332 | 35321.9 | 1 | UniProt (A8T7J8) UniProt (by SIFTS) (Q6SW34) | Human betaherpesvirus 5 | |
| 3 | C (B) | Protein UL141 | polymer | 273 | 31039.0 | 1 | UniProt (Q6RJQ3) Pfam (PF16758) | Human betaherpesvirus 5 | |
| 4 | D (D) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 5 | E (E) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 6 | F, G, H, I, J... (A, C, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 9 | Chemie (NAG) |
Sequence modifications
C: 25 - 313 (UniProt: A8T7J8)
B: 30 - 279 (UniProt: Q6RJQ3)
| PDB | External Database | Details |
|---|---|---|
| Gly 314 | - | expression tag |
| Gly 315 | - | expression tag |
| Ser 316 | - | expression tag |
| Gly 317 | - | expression tag |
| Gly 318 | - | expression tag |
| Ser 319 | - | expression tag |
| Gly 320 | - | expression tag |
| Ser 321 | - | expression tag |
| Asp 322 | - | expression tag |
| Asp 323 | - | expression tag |
| Asp 324 | - | expression tag |
| Asp 325 | - | expression tag |
| Lys 326 | - | expression tag |
| Ala 327 | - | expression tag |
| Gly 328 | - | expression tag |
| Trp 329 | - | expression tag |
| Ser 330 | - | expression tag |
| His 331 | - | expression tag |
| Pro 332 | - | expression tag |
| Gln 333 | - | expression tag |
| Phe 334 | - | expression tag |
| Glu 335 | - | expression tag |
| Lys 336 | - | expression tag |
| Gly 337 | - | expression tag |
| Gly 338 | - | expression tag |
| Gly 339 | - | expression tag |
| Ser 340 | - | expression tag |
| Gly 341 | - | expression tag |
| Gly 342 | - | expression tag |
| Gly 343 | - | expression tag |
| Ser 344 | - | expression tag |
| Gly 345 | - | expression tag |
| Gly 346 | - | expression tag |
| Gly 347 | - | expression tag |
| Ser 348 | - | expression tag |
| Trp 349 | - | expression tag |
| Ser 350 | - | expression tag |
| His 351 | - | expression tag |
| Pro 352 | - | expression tag |
| Gln 353 | - | expression tag |
| Phe 354 | - | expression tag |
| Glu 355 | - | expression tag |
| Lys 356 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly 280 | - | expression tag |
| Ser 281 | - | expression tag |
| Gly 282 | - | expression tag |
| Gly 283 | - | expression tag |
| Gly 284 | - | expression tag |
| Ser 285 | - | expression tag |
| Leu 286 | - | expression tag |
| Glu 287 | - | expression tag |
| Val 288 | - | expression tag |
| Leu 289 | - | expression tag |
| Phe 290 | - | expression tag |
| Gln 291 | - | expression tag |
| Gly 292 | - | expression tag |
| Pro 293 | - | expression tag |
| Gly 294 | - | expression tag |
| His 295 | - | expression tag |
| His 296 | - | expression tag |
| His 297 | - | expression tag |
| His 298 | - | expression tag |
| His 299 | - | expression tag |
| His 300 | - | expression tag |
| His 301 | - | expression tag |
| His 302 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 143858.1 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1010.9 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1990.9 | |
| All* | Total formula weight | 146859.9 |
