9DFU
X-ray crystal structure of the second Viperin-like enzyme from T. virens variant F40H with bound CTP and SAM
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Radical SAM core domain-containing protein | polymer | 321 | 37369.6 | 1 | UniProt (G9N0G3) Pfam (PF13353) Pfam (PF04055) | Trichoderma virens | |
| 2 | B (A) | CYTIDINE-5'-TRIPHOSPHATE | non-polymer | 483.2 | 1 | Chemie (CTP) | |||
| 3 | C (A) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 1 | Chemie (SF4) | |||
| 4 | D (A) | S-ADENOSYLMETHIONINE | non-polymer | 398.4 | 1 | Chemie (SAM) | |||
| 5 | E (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 6 | F (A) | water | water | 18.0 | 91 | Chemie (HOH) |
Sequence modifications
A: 31 - 328 (UniProt: G9N0G3)
| PDB | External Database | Details |
|---|---|---|
| Met 8 | - | initiating methionine |
| His 9 | - | expression tag |
| His 10 | - | expression tag |
| His 11 | - | expression tag |
| His 12 | - | expression tag |
| His 13 | - | expression tag |
| His 14 | - | expression tag |
| Ser 15 | - | expression tag |
| Ser 16 | - | expression tag |
| Gly 17 | - | expression tag |
| Val 18 | - | expression tag |
| Asp 19 | - | expression tag |
| Leu 20 | - | expression tag |
| Gly 21 | - | expression tag |
| Thr 22 | - | expression tag |
| Glu 23 | - | expression tag |
| Asn 24 | - | expression tag |
| Leu 25 | - | expression tag |
| Tyr 26 | - | expression tag |
| Phe 27 | - | expression tag |
| Gln 28 | - | expression tag |
| Ser 29 | - | expression tag |
| Met 30 | - | expression tag |
| His 40 | Phe 40 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 37369.6 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 1268.7 | |
| All* | Total formula weight | 38638.2 |
