9DAZ
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. Complex of fAPN with FCoV-23 RBD
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | Aminopeptidase N,Immunoglobulin gamma-1 heavy chain | polymer | 1184 | 133824.0 | 2 | UniProt (P79171) UniProt (P0DOX5) Pfam (PF17900) Pfam (PF01433) Pfam (PF11838) | Felis catus (domestic cat) | AP-N,fAPN,Alanyl aminopeptidase,Aminopeptidase M,AP-M,Microsomal aminopeptidase,Immunoglobulin gamma-1 heavy chain NIE |
| 2 | B, D (B, D) | Spike glycoprotein | polymer | 213 | 23214.1 | 2 | Pfam (PF01600) UniProt (by SIFTS) (P10033) | Feline coronavirus | |
| 3 | E, F, G, H, J... (E, F, G, H, J...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 10 | In PDB GlyTouCan (G42666HT) | |||
| 4 | I, O (I, O) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 2 | In PDB GlyTouCan (G21290RB) | |||
| 5 | Q, S (A, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 6 | R, T (A, C) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 7 | U, V (A, C) | water | water | 18.0 | 220 | Chemie (HOH) |
Sequence modifications
A, C: 64 - 967 (UniProt: P79171)
A, C: 984 - 1215 (UniProt: P0DOX5)
| PDB | External Database | Details |
|---|---|---|
| Met 32 | - | expression tag |
| Gly 33 | - | expression tag |
| Ile 34 | - | expression tag |
| Leu 35 | - | expression tag |
| Pro 36 | - | expression tag |
| Ser 37 | - | expression tag |
| Pro 38 | - | expression tag |
| Gly 39 | - | expression tag |
| Met 40 | - | expression tag |
| Pro 41 | - | expression tag |
| Ala 42 | - | expression tag |
| Leu 43 | - | expression tag |
| Leu 44 | - | expression tag |
| Ser 45 | - | expression tag |
| Leu 46 | - | expression tag |
| Val 47 | - | expression tag |
| Ser 48 | - | expression tag |
| Leu 49 | - | expression tag |
| Leu 50 | - | expression tag |
| Ser 51 | - | expression tag |
| Val 52 | - | expression tag |
| Leu 53 | - | expression tag |
| Leu 54 | - | expression tag |
| Met 55 | - | expression tag |
| Gly 56 | - | expression tag |
| Cys 57 | - | expression tag |
| Val 58 | - | expression tag |
| Ala 59 | - | expression tag |
| Glu 60 | - | expression tag |
| Thr 61 | - | expression tag |
| Gly 62 | - | expression tag |
| Thr 63 | - | expression tag |
| Gly 968 | - | linker |
| Gly 969 | - | linker |
| Ser 970 | - | linker |
| Leu 971 | - | linker |
| Val 972 | - | linker |
| Pro 973 | - | linker |
| Arg 974 | - | linker |
| Gly 975 | - | linker |
| Ser 976 | - | linker |
| Gly 977 | - | linker |
| Ser 978 | - | linker |
| Gly 979 | - | linker |
| Ser 980 | - | linker |
| Gly 981 | - | linker |
| Asp 982 | - | linker |
| Pro 983 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 314076.2 | |
| Branched | Number of molecules | 12 |
| Total formula weight | 5385.1 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 573.2 | |
| All* | Total formula weight | 320034.5 |
