9DA9
Crystal structure of GluN1/GluN2A agonist-binding domains in complex with 7CKA and glutamate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | Glutamate receptor ionotropic, NMDA 1 | polymer | 292 | 33340.0 | 1 | UniProt (P35438) Pfam (PF10613) Pfam (PF00060) UniProt (by SIFTS) (P35439) | Rattus norvegicus (Norway rat) | GluN1,Glutamate [NMDA] receptor subunit zeta-1,N-methyl-D-aspartate receptor subunit NR1,NMD-R1 |
2 | B (B) | Glutamate receptor ionotropic, NMDA 2A | polymer | 283 | 31785.3 | 1 | UniProt (Q00959) Pfam (PF10613) Pfam (PF00060) | Rattus norvegicus (Norway rat) | GluN2A,Glutamate [NMDA] receptor subunit epsilon-1,N-methyl D-aspartate receptor subtype 2A,NMDAR2A,NR2A |
3 | C (A) | 7-Chlorokynurenic acid | non-polymer | 223.6 | 1 | Chemie (CKA) | |||
4 | D (B) | GLUTAMIC ACID | non-polymer | 147.1 | 1 | Chemie (GLU) | |||
5 | E, F (A, B) | water | water | 18.0 | 202 | Chemie (HOH) |
Sequence modifications
A: 2 - 292 (UniProt: P35438)
B: 5 - 286 (UniProt: Q00959)
PDB | External Database | Details |
---|---|---|
Gly 1 | - | expression tag |
Ile 68 | Val 460 | conflict |
- | Glu 545 | deletion |
- | Ile 546 | deletion |
- | Pro 547 | deletion |
- | Arg 548 | deletion |
- | Ser 549 | deletion |
- | Thr 550 | deletion |
- | Leu 551 | deletion |
- | Asp 552 | deletion |
- | Ser 553 | deletion |
- | Phe 554 | deletion |
- | Met 555 | deletion |
- | Gln 556 | deletion |
- | Pro 557 | deletion |
- | Phe 558 | deletion |
- | Gln 559 | deletion |
- | Ser 560 | deletion |
- | Thr 561 | deletion |
- | Leu 562 | deletion |
- | Trp 563 | deletion |
- | Leu 564 | deletion |
- | Leu 565 | deletion |
- | Val 566 | deletion |
- | Gly 567 | deletion |
- | Leu 568 | deletion |
- | Ser 569 | deletion |
- | Val 570 | deletion |
- | His 571 | deletion |
- | Val 572 | deletion |
- | Val 573 | deletion |
- | Ala 574 | deletion |
- | Val 575 | deletion |
- | Met 576 | deletion |
- | Leu 577 | deletion |
- | Tyr 578 | deletion |
- | Leu 579 | deletion |
- | Leu 580 | deletion |
- | Asp 581 | deletion |
- | Arg 582 | deletion |
- | Phe 583 | deletion |
- | Ser 584 | deletion |
- | Pro 585 | deletion |
- | Phe 586 | deletion |
- | Gly 587 | deletion |
- | Arg 588 | deletion |
- | Phe 589 | deletion |
- | Lys 590 | deletion |
- | Val 591 | deletion |
- | Asn 592 | deletion |
- | Ser 593 | deletion |
- | Glu 594 | deletion |
- | Glu 595 | deletion |
- | Glu 596 | deletion |
- | Glu 597 | deletion |
- | Glu 598 | deletion |
- | Asp 599 | deletion |
- | Ala 600 | deletion |
- | Leu 601 | deletion |
- | Thr 602 | deletion |
- | Leu 603 | deletion |
- | Ser 604 | deletion |
- | Ser 605 | deletion |
- | Ala 606 | deletion |
- | Met 607 | deletion |
- | Trp 608 | deletion |
- | Phe 609 | deletion |
- | Ser 610 | deletion |
- | Trp 611 | deletion |
- | Gly 612 | deletion |
- | Val 613 | deletion |
- | Leu 614 | deletion |
- | Leu 615 | deletion |
- | Asn 616 | deletion |
- | Ser 617 | deletion |
- | Gly 618 | deletion |
- | Ile 619 | deletion |
- | Gly 620 | deletion |
- | Glu 621 | deletion |
- | Gly 622 | deletion |
- | Ala 623 | deletion |
- | Pro 624 | deletion |
- | Arg 625 | deletion |
- | Ser 626 | deletion |
- | Phe 627 | deletion |
- | Ser 628 | deletion |
- | Ala 629 | deletion |
- | Arg 630 | deletion |
- | Ile 631 | deletion |
- | Leu 632 | deletion |
- | Gly 633 | deletion |
- | Met 634 | deletion |
- | Val 635 | deletion |
- | Trp 636 | deletion |
- | Ala 637 | deletion |
- | Gly 638 | deletion |
- | Phe 639 | deletion |
- | Ala 640 | deletion |
- | Met 641 | deletion |
- | Ile 642 | deletion |
- | Ile 643 | deletion |
- | Val 644 | deletion |
- | Ala 645 | deletion |
- | Ser 646 | deletion |
- | Tyr 647 | deletion |
- | Thr 648 | deletion |
- | Ala 649 | deletion |
- | Asn 650 | deletion |
- | Leu 651 | deletion |
- | Ala 652 | deletion |
- | Ala 653 | deletion |
- | Phe 654 | deletion |
- | Leu 655 | deletion |
- | Val 656 | deletion |
- | Leu 657 | deletion |
- | Asp 658 | deletion |
- | Arg 659 | deletion |
- | Pro 660 | deletion |
Gly 153 | Glu 661 | conflict |
Thr 154 | Glu 662 | conflict |
PDB | External Database | Details |
---|---|---|
Ser 4 | - | expression tag |
- | Ser 540 | deletion |
- | Asn 541 | deletion |
- | Gly 542 | deletion |
- | Thr 543 | deletion |
- | Val 544 | deletion |
- | Ser 545 | deletion |
- | Pro 546 | deletion |
- | Ser 547 | deletion |
- | Ala 548 | deletion |
- | Phe 549 | deletion |
- | Leu 550 | deletion |
- | Glu 551 | deletion |
- | Pro 552 | deletion |
- | Phe 553 | deletion |
- | Ser 554 | deletion |
- | Ala 555 | deletion |
- | Ser 556 | deletion |
- | Val 557 | deletion |
- | Trp 558 | deletion |
- | Val 559 | deletion |
- | Met 560 | deletion |
- | Met 561 | deletion |
- | Phe 562 | deletion |
- | Val 563 | deletion |
- | Met 564 | deletion |
- | Leu 565 | deletion |
- | Leu 566 | deletion |
- | Ile 567 | deletion |
- | Val 568 | deletion |
- | Ser 569 | deletion |
- | Ala 570 | deletion |
- | Ile 571 | deletion |
- | Ala 572 | deletion |
- | Val 573 | deletion |
- | Phe 574 | deletion |
- | Val 575 | deletion |
- | Phe 576 | deletion |
- | Glu 577 | deletion |
- | Tyr 578 | deletion |
- | Phe 579 | deletion |
- | Ser 580 | deletion |
- | Pro 581 | deletion |
- | Val 582 | deletion |
- | Gly 583 | deletion |
- | Tyr 584 | deletion |
- | Asn 585 | deletion |
- | Arg 586 | deletion |
- | Asn 587 | deletion |
- | Leu 588 | deletion |
- | Ala 589 | deletion |
- | Lys 590 | deletion |
- | Gly 591 | deletion |
- | Lys 592 | deletion |
- | Ala 593 | deletion |
- | Pro 594 | deletion |
- | His 595 | deletion |
- | Gly 596 | deletion |
- | Pro 597 | deletion |
- | Ser 598 | deletion |
- | Phe 599 | deletion |
- | Thr 600 | deletion |
- | Ile 601 | deletion |
- | Gly 602 | deletion |
- | Lys 603 | deletion |
- | Ala 604 | deletion |
- | Ile 605 | deletion |
- | Trp 606 | deletion |
- | Leu 607 | deletion |
- | Leu 608 | deletion |
- | Trp 609 | deletion |
- | Gly 610 | deletion |
- | Leu 611 | deletion |
- | Val 612 | deletion |
- | Phe 613 | deletion |
- | Asn 614 | deletion |
- | Asn 615 | deletion |
- | Ser 616 | deletion |
- | Val 617 | deletion |
- | Pro 618 | deletion |
- | Val 619 | deletion |
- | Gln 620 | deletion |
- | Asn 621 | deletion |
- | Pro 622 | deletion |
- | Lys 623 | deletion |
- | Gly 624 | deletion |
- | Thr 625 | deletion |
- | Thr 626 | deletion |
- | Ser 627 | deletion |
- | Lys 628 | deletion |
- | Ile 629 | deletion |
- | Met 630 | deletion |
- | Val 631 | deletion |
- | Ser 632 | deletion |
- | Val 633 | deletion |
- | Trp 634 | deletion |
- | Ala 635 | deletion |
- | Phe 636 | deletion |
- | Phe 637 | deletion |
- | Ala 638 | deletion |
- | Val 639 | deletion |
- | Ile 640 | deletion |
- | Phe 641 | deletion |
- | Leu 642 | deletion |
- | Ala 643 | deletion |
- | Ser 644 | deletion |
- | Tyr 645 | deletion |
- | Thr 646 | deletion |
- | Ala 647 | deletion |
- | Asn 648 | deletion |
- | Leu 649 | deletion |
- | Ala 650 | deletion |
- | Ala 651 | deletion |
- | Phe 652 | deletion |
- | Met 653 | deletion |
- | Ile 654 | deletion |
- | Gln 655 | deletion |
- | Glu 656 | deletion |
- | Glu 657 | deletion |
- | Phe 658 | deletion |
Gly 143 | Val 659 | conflict |
Thr 144 | Asp 660 | conflict |
Thr 242 | Ser 758 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 65125.3 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 370.7 | |
All* | Total formula weight | 65496.1 |