9D89
E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (0) | 50S ribosomal protein L33 | polymer | 55 | 6388.6 | 1 | UniProt (C3SME7) Pfam (PF00471) UniProt (by SIFTS) (P0A7N9) | Escherichia coli | |
| 2 | B (1) | 50S ribosomal protein L34 | polymer | 46 | 5397.5 | 1 | UniProt (B7MGC4) Pfam (PF00468) UniProt (by SIFTS) (P0A7P5) | Escherichia coli | |
| 3 | C (B) | 50S ribosomal protein L35 | polymer | 65 | 7313.0 | 1 | UniProt (P0A7Q1) Pfam (PF01632) | Escherichia coli | Large ribosomal subunit protein bL35,Ribosomal protein A |
| 4 | D (C) | 50S ribosomal protein L36 | polymer | 38 | 4377.4 | 1 | UniProt (A0A0E2L017) Pfam (PF00444) UniProt (by SIFTS) (P0A7Q6) | Escherichia coli | |
| 5 | E (D) | 23S rRNA | polymer | 2728 | 885064.5 | 1 | Escherichia coli | ||
| 6 | F (E) | 5S rRNA | polymer | 119 | 38483.9 | 1 | GenBank (1815787944) | Escherichia coli | |
| 7 | G (F) | 50S ribosomal protein L2 | polymer | 273 | 29923.6 | 1 | UniProt (P60422) Pfam (PF00181) Pfam (PF03947) | Escherichia coli | Large ribosomal subunit protein uL2 |
| 8 | H (G) | 50S ribosomal protein L3 | polymer | 209 | 22291.6 | 1 | UniProt (C3SQU2) Pfam (PF00297) UniProt (by SIFTS) (P60438) | Escherichia coli | |
| 9 | I (H) | 50S ribosomal protein L4 | polymer | 201 | 22121.6 | 1 | UniProt (A1AGK6) Pfam (PF00573) UniProt (by SIFTS) (P60723) | Escherichia coli | |
| 10 | J (I) | 50S ribosomal protein L15 | polymer | 144 | 15008.5 | 1 | UniProt (A0A037Y8L6) Pfam (PF00828) UniProt (by SIFTS) (P02413) | Escherichia coli | |
| 11 | K (J) | 50S ribosomal protein L17 | polymer | 118 | 13505.7 | 1 | Pfam (PF01196) UniProt (by SIFTS) (P0AG44) | Escherichia coli | |
| 12 | L (K) | Large ribosomal subunit protein uL23 | polymer | 93 | 10546.5 | 1 | UniProt (C3SQV2) Pfam (PF00276) UniProt (by SIFTS) (P0ADZ0) | Escherichia coli | |
| 13 | M (L) | 50S ribosomal protein L27 | polymer | 78 | 8419.6 | 1 | Pfam (PF01016) UniProt (by SIFTS) (P0A7L8) | Escherichia coli | |
| 14 | N (M) | 50S ribosomal protein L32 | polymer | 56 | 6332.2 | 1 | UniProt (A0A828UBL8) Pfam (PF01783) UniProt (by SIFTS) (P0A7N4) | Escherichia coli | |
| 15 | O (f) | 50S ribosomal protein L5 | polymer | 177 | 20073.2 | 1 | UniProt (A0A4P8BX24) Pfam (PF00281) Pfam (PF00673) UniProt (by SIFTS) (P62399) | Escherichia coli | |
| 16 | P (g) | Large ribosomal subunit protein uL6 | polymer | 176 | 18801.6 | 1 | UniProt (C3SR17) Pfam (PF00347) UniProt (by SIFTS) (P0AG55) | Escherichia coli | |
| 17 | Q (h) | 50S ribosomal protein L9 | polymer | 38 | 4028.7 | 1 | Pfam (PF01281) UniProt (by SIFTS) (P0A7R1) | Escherichia coli | |
| 18 | R (i) | Large ribosomal subunit protein uL13 | polymer | 142 | 16050.6 | 1 | UniProt (P0AA12) Pfam (PF00572) UniProt (by SIFTS) (P0AA10) | Escherichia coli | |
| 19 | S (j) | 50S ribosomal protein L14 | polymer | 123 | 13565.1 | 1 | UniProt (S1NW45) Pfam (PF00238) UniProt (by SIFTS) (P0ADY3) | Escherichia coli | |
| 20 | T (l) | 50S ribosomal protein L16 | polymer | 135 | 15196.1 | 1 | Pfam (PF00252) UniProt (by SIFTS) (P0ADY7) | Escherichia coli | |
| 21 | U (n) | 50S ribosomal protein L18 | polymer | 116 | 12663.5 | 1 | Pfam (PF00861) UniProt (by SIFTS) (P0C018) | Escherichia coli | |
| 22 | V (o) | 50S ribosomal protein L19 | polymer | 114 | 13028.1 | 1 | UniProt (S1PSA3) Pfam (PF01245) UniProt (by SIFTS) (P0A7K6) | Escherichia coli | |
| 23 | W (p) | Large ribosomal subunit protein bL20 | polymer | 117 | 13396.8 | 1 | UniProt (C3T7Q7) Pfam (PF00453) UniProt (by SIFTS) (P0A7L3) | Escherichia coli | |
| 24 | X (q) | 50S ribosomal protein L21 | polymer | 103 | 11586.4 | 1 | UniProt (C3SSG2) Pfam (PF00829) UniProt (by SIFTS) (P0AG48) | Escherichia coli | |
| 25 | Y (r) | 50S ribosomal protein L22 | polymer | 110 | 12253.4 | 1 | UniProt (P61175) Pfam (PF00237) | Escherichia coli | Large ribosomal subunit protein uL22 |
| 26 | Z (t) | Large ribosomal subunit protein uL24 | polymer | 102 | 11078.9 | 1 | UniProt (A0A7U9LWC1) Pfam (PF00467) Pfam (PF17136) UniProt (by SIFTS) (P60624) | Escherichia coli | 50S ribosomal protein L24 |
| 27 | AA (u) | Large ribosomal subunit protein bL25 | polymer | 94 | 10713.5 | 1 | UniProt (P68919) Pfam (PF01386) | Escherichia coli | |
| 28 | BA (w) | 50S ribosomal protein L28 | polymer | 77 | 8896.4 | 1 | UniProt (A0A0E2KZD0) Pfam (PF00830) UniProt (by SIFTS) (P0A7M2) | Escherichia coli | |
| 29 | CA (x) | Large ribosomal subunit protein uL29 | polymer | 62 | 7155.3 | 1 | UniProt (P0A7M8) Pfam (PF00831) UniProt (by SIFTS) (P0A7M6) | Escherichia coli | |
| 30 | DA (y) | 50S ribosomal protein L30 | polymer | 58 | 6423.6 | 1 | UniProt (P0AG51) Pfam (PF00327) | Escherichia coli | Large ribosomal subunit protein uL30 |
| 31 | EA (T) | Rumicidin-2 (12-27) | polymer | 16 | 2008.4 | 1 | Beatragus hunteri | ||
| 32 | FA (C) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 33 | AB, AC, AD, AE, AF... (D, E, F, G, M) | MAGNESIUM ION | non-polymer | 24.3 | 204 | Chemie (MG) | |||
| 34 | AI, AJ, AK, AL, BI... (D, F, H) | POTASSIUM ION | non-polymer | 39.1 | 93 | Chemie (K) | |||
| 35 | RL (l) | (2S)-2-amino-4-(methylsulfanyl)butane-1-thiol | non-polymer | 151.3 | 1 | Chemie (MS6) | |||
| 36 | AM, BM, CM, DM, EM... (I, J, K, L, M...) | water | water | 18.0 | 4308 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 31 |
| Total formula weight | 1272093.6 | |
| Non-Polymers* | Number of molecules | 299 |
| Total formula weight | 8811.0 | |
| All* | Total formula weight | 1280904.7 |
