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9D7L

Minimal PutA proline dehydrogenase domain (design #2) covalently inactivated by (S)-but-3-yn-2-ylglycine

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Bifunctional protein PutApolymer39643774.02UniProt (F7X6I3)
Pfam (PF18327)
Pfam (PF14850)
Pfam (PF01619)
Sinorhizobium meliloti
2C, E
(A, B)
{[(3E)-4-{10-[(2S,3S,4R)-5-{[(R)-{[(R)-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-2,3,4-trihydroxypentyl]-7,8-dimethyl-2,4-dioxo-2,3,4,10-tetrahydrobenzo[g]pteridin-5(1H)-yl}but-3-en-2-ylidene]amino}acetic acid (non-preferred name)non-polymer912.72Chemie (A1BC6)
3D, F
(A, B)
FORMIC ACIDnon-polymer46.02Chemie (FMT)
4G, H
(A, B)
waterwater18.0258Chemie (HOH)
Sequence modifications
A, B: 26 - 185 (UniProt: F7X6I3)
PDBExternal DatabaseDetails
Ser 25-expression tag
A, B: 190 - 522 (UniProt: F7X6I3)
PDBExternal DatabaseDetails
Ser 186-linker
Ser 187-linker
Gly 188-linker
Ser 189-linker
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight87548.0
Non-Polymers*Number of molecules4
Total formula weight1917.4
All*Total formula weight89465.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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