9D1Z
Structure of G75Q Ubiquitin bound to KLHDC3-EloB/C
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Kelch domain-containing protein 3 | polymer | 383 | 43245.1 | 1 | UniProt (Q9BQ90) Pfam (PF13964) Pfam (PF13418) Pfam (PF07646) Pfam (PF01344) | Homo sapiens (human) | Testis intracellular mediator protein |
| 2 | B (B) | Elongin-B | polymer | 104 | 11748.4 | 1 | UniProt (Q15370) Pfam (PF00240) | Homo sapiens (human) | EloB,Elongin 18 kDa subunit,RNA polymerase II transcription factor SIII subunit B,SIII p18,Transcription elongation factor B polypeptide 2 |
| 3 | C (C) | Elongin-C | polymer | 121 | 13871.6 | 1 | UniProt (Q15369) Pfam (PF03931) | Homo sapiens (human) | EloC,Elongin 15 kDa subunit,RNA polymerase II transcription factor SIII subunit C,SIII p15,Transcription elongation factor B polypeptide 1 |
| 4 | D (D) | Ubiquitin | polymer | 76 | 8647.9 | 1 | UniProt (P0CG48) Pfam (PF00240) | Homo sapiens (human) | |
| 5 | E, F, G, H (A) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 4 | Chemie (MPD) | |||
| 6 | I, J, K, L (A, B, C, D) | water | water | 18.0 | 678 | Chemie (HOH) |
Sequence modifications
A: 1 - 382 (UniProt: Q9BQ90)
C: 17 - 112 (UniProt: Q15369)
D: 1 - 76 (UniProt: P0CG48)
| PDB | External Database | Details |
|---|---|---|
| Ace 0 | - | acetylation |
| Lys 382 | Gly 382 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Met -8 | - | initiating methionine |
| Ser -7 | - | expression tag |
| Tyr -6 | - | expression tag |
| Tyr -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
| His 1 | - | expression tag |
| Asp 2 | - | expression tag |
| Tyr 3 | - | expression tag |
| Asp 4 | - | expression tag |
| Ile 5 | - | expression tag |
| Pro 6 | - | expression tag |
| Thr 7 | - | expression tag |
| Thr 8 | - | expression tag |
| Glu 9 | - | expression tag |
| Asn 10 | - | expression tag |
| Leu 11 | - | expression tag |
| Tyr 12 | - | expression tag |
| Gly 13 | - | expression tag |
| Gln 14 | - | expression tag |
| Gly 15 | - | expression tag |
| Ser 16 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gln 75 | Gly 75 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 77513.0 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 472.7 | |
| All* | Total formula weight | 77985.7 |
