9CYA
C387S variant of D-ornithine/D-lysine decarboxylase complexed with HEPES and putrescine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | D-ornithine/D-lysine decarboxylase | polymer | 478 | 54388.2 | 1 | UniProt (Q8ZNC4) Pfam (PF00278) Pfam (PF02784) | Salmonella enterica subsp. enterica serovar Typhimurium | D-Orn/D-Lys decarboxylase,DOKDC |
| 2 | B, M (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 3 | C, K (A) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 4 | D (A) | 1,4-DIAMINOBUTANE | non-polymer | 88.2 | 1 | Chemie (PUT) | |||
| 5 | E (A) | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 1 | Chemie (EPE) | |||
| 6 | F, G (A) | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 2 | Chemie (DMS) | |||
| 7 | H (A) | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
| 8 | I, J (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 9 | L (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 10 | N (A) | water | water | 18.0 | 489 | Chemie (HOH) |
Sequence modifications
A: 1 - 465 (UniProt: Q8ZNC4)
| PDB | External Database | Details |
|---|---|---|
| Ser 387 | Cys 387 | engineered mutation |
| Leu 466 | - | expression tag |
| Leu 467 | - | expression tag |
| Ala 468 | - | expression tag |
| Ala 469 | - | expression tag |
| Ala 470 | - | expression tag |
| Leu 471 | - | expression tag |
| Glu 472 | - | expression tag |
| His 473 | - | expression tag |
| His 474 | - | expression tag |
| His 475 | - | expression tag |
| His 476 | - | expression tag |
| His 477 | - | expression tag |
| His 478 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 54388.2 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 874.9 | |
| All* | Total formula weight | 55263.1 |
