9CU4
KSHV glycoprotein B ectodomain, postfusion form
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | ORF8 | polymer | 634 | 71326.8 | 3 | UniProt (A0A7D5YE70) Pfam (PF17416) Pfam (PF17417) Pfam (PF00606) UniProt (by SIFTS) (F5HB81) | Human gammaherpesvirus 8 | |
| 2 | D, F, H (D, F, H) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1397.2 | 3 | In PDB GlyTouCan (G61846BY) | |||
| 3 | E, G, I (E, G, I) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
| 4 | AA, BA, CA, DA, EA... (C, A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 24 | Chemie (NAG) |
Sequence modifications
A, B, C: 54 - 687 (UniProt: A0A7D5YE70)
| PDB | External Database | Details |
|---|---|---|
| Pro 470 | Asp 470 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 213980.3 | |
| Branched | Number of molecules | 6 |
| Total formula weight | 5464.9 | |
| Non-Polymers* | Number of molecules | 24 |
| Total formula weight | 5309.0 | |
| All* | Total formula weight | 224754.2 |
