9CO7
Local refinement of BA.5 spike/Nanosota-9 complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (B, A) | Spike glycoprotein | polymer | 1229 | 136634.5 | 2 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) | Severe acute respiratory syndrome coronavirus 2 | S glycoprotein,E2,Peplomer protein |
| 2 | B, D (E, D) | Nanosota-9 | polymer | 150 | 16311.6 | 2 | Vicugna pacos |
Sequence modifications
B, A: 14 - 1211 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Ile 19 | Thr 19 | conflict |
| - | Leu 24 | deletion |
| - | Pro 25 | deletion |
| - | Pro 26 | deletion |
| Ser 24 | Ala 27 | conflict |
| - | His 69 | deletion |
| - | Val 70 | deletion |
| Asp 137 | Gly 142 | conflict |
| Gly 208 | Val 213 | conflict |
| Asp 334 | Gly 339 | conflict |
| Phe 366 | Ser 371 | conflict |
| Pro 368 | Ser 373 | conflict |
| Phe 370 | Ser 375 | conflict |
| Ala 371 | Thr 376 | conflict |
| Asn 400 | Asp 405 | conflict |
| Ser 403 | Arg 408 | conflict |
| Asn 412 | Lys 417 | conflict |
| Lys 435 | Asn 440 | conflict |
| Arg 447 | Leu 452 | conflict |
| Asn 472 | Ser 477 | conflict |
| Lys 473 | Thr 478 | conflict |
| Ala 479 | Glu 484 | conflict |
| Val 481 | Phe 486 | conflict |
| Arg 493 | Gln 498 | conflict |
| Tyr 496 | Asn 501 | conflict |
| His 500 | Tyr 505 | conflict |
| Gly 609 | Asp 614 | conflict |
| Tyr 650 | His 655 | conflict |
| Lys 674 | Asn 679 | conflict |
| His 676 | Pro 681 | conflict |
| Ala 677 | Arg 682 | conflict |
| Gly 678 | Arg 683 | conflict |
| Lys 759 | Asn 764 | conflict |
| Tyr 791 | Asp 796 | conflict |
| Pro 812 | Phe 817 | conflict |
| Pro 887 | Ala 892 | conflict |
| Pro 894 | Ala 899 | conflict |
| Pro 937 | Ala 942 | conflict |
| His 949 | Gln 954 | conflict |
| Lys 964 | Asn 969 | conflict |
| Pro 981 | Lys 986 | conflict |
| Pro 982 | Val 987 | conflict |
| Gly 1207 | Trp 1212 | conflict |
| Ser 1208 | Pro 1213 | conflict |
| Gly 1209 | Trp 1214 | conflict |
| Pro 1212 | - | expression tag |
| Glu 1213 | - | expression tag |
| Ala 1214 | - | expression tag |
| Pro 1215 | - | expression tag |
| Arg 1216 | - | expression tag |
| Asp 1217 | - | expression tag |
| Gly 1218 | - | expression tag |
| Gln 1219 | - | expression tag |
| Ala 1220 | - | expression tag |
| Tyr 1221 | - | expression tag |
| Val 1222 | - | expression tag |
| Arg 1223 | - | expression tag |
| Lys 1224 | - | expression tag |
| Asp 1225 | - | expression tag |
| Gly 1226 | - | expression tag |
| Glu 1227 | - | expression tag |
| Trp 1228 | - | expression tag |
| Val 1229 | - | expression tag |
| Leu 1230 | - | expression tag |
| Leu 1231 | - | expression tag |
| Ser 1232 | - | expression tag |
| Thr 1233 | - | expression tag |
| Phe 1234 | - | expression tag |
| Leu 1235 | - | expression tag |
| Gly 1236 | - | expression tag |
| His 1237 | - | expression tag |
| His 1238 | - | expression tag |
| His 1239 | - | expression tag |
| His 1240 | - | expression tag |
| His 1241 | - | expression tag |
| His 1242 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 305892.2 | |
| All* | Total formula weight | 305892.2 |
