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9CKM

The 24mer DNA Duplex 5'-GCTGGAAAGTTTAAACTTTCCAGC-3' Bound by the Diamidine DB2457 at Single G Sites

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA (5'-D(*GP*CP*TP*GP*GP*AP*AP*AP*GP*TP*TP*T)-3')polymer123717.41synthetic construct
2B
(C)
DNA (5'-D(*GP*CP*TP*GP*GP*AP*AP*AP*GP*TP*TP*TP*AP*AP*AP*CP*TP*TP*TP*CP*CP*AP*GP*C)-3')polymer247368.81synthetic construct
3C
(B)
DNA (5'-D(P*AP*AP*AP*CP*TP*TP*TP*CP*CP*AP*GP*C)-3')polymer123606.41synthetic construct
4AA, D, E, F, G...
(B, A, C)
CALCIUM IONnon-polymer40.122Chemie (CA)
5M, T
(C, B)
4-{5-[5-(4-carbamimidoylphenyl)-1-methyl-1H-1,3-benzimidazol-2-yl]thiophen-2-yl}benzene-1-carboximidamidenon-polymer450.62Chemie (A1AY9)
6BA, CA, DA
(A, C, B)
waterwater18.0166Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight14692.6
Non-Polymers*Number of molecules24
Total formula weight1782.8
All*Total formula weight16475.4
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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