9CIN

Fab fragment of Antibody with NiV glycoprotein F

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, F, G (A, B, C)	Fusion glycoprotein F0	polymer	552	60666.6	3	UniProt (Q9IH63)	Henipavirus nipahense	Protein F
2	B, C, D (H, J, M)	Antibody Heavy Chain	polymer	122	13464.0	3		Mus musculus
3	E, H, I (L, K, N)	Antibody Light Chain	polymer	107	11568.9	3		Mus musculus
4	J, L, N (D, F, I)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	3	In PDB GlyTouCan (G42666HT)
5	K, M, O (E, G, O)	alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		748.7	3	In PDB GlyTouCan (G81315DD)
6	P, Q, R, S, T... (A, B, C)	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	6	Chemie (NAG)

Sequence modifications

A, B, C: 26 - 482 (UniProt: Q9IH63)

PDB	External Database	Details
Met -5	-	initiating methionine
Gly -4	-	expression tag
Ile -3	-	expression tag
Leu -2	-	expression tag
Pro -1	-	expression tag
Ser 0	-	expression tag
Pro 1	-	expression tag
Gly 2	-	expression tag
Met 3	-	expression tag
Pro 4	-	expression tag
Ala 5	-	expression tag
Leu 6	-	expression tag
Leu 7	-	expression tag
Ser 8	-	expression tag
Leu 9	-	expression tag
Val 10	-	expression tag
Ser 11	-	expression tag
Leu 12	-	expression tag
Leu 13	-	expression tag
Ser 14	-	expression tag
Val 15	-	expression tag
Leu 16	-	expression tag
Leu 17	-	expression tag
Met 18	-	expression tag
Gly 19	-	expression tag
Cys 20	-	expression tag
Val 21	-	expression tag
Ala 22	-	expression tag
Glu 23	-	expression tag
Thr 24	-	expression tag
Gly 25	-	expression tag
Cys 104	Leu 104	conflict
Cys 114	Ile 114	conflict
Phe 172	Leu 172	conflict
Pro 191	Ser 191	conflict
Gly 483	-	expression tag
Thr 484	-	expression tag
Met 485	-	expression tag
Lys 486	-	expression tag
Gln 487	-	expression tag
Ile 488	-	expression tag
Glu 489	-	expression tag
Asp 490	-	expression tag
Lys 491	-	expression tag
Ile 492	-	expression tag
Glu 493	-	expression tag
Glu 494	-	expression tag
Ile 495	-	expression tag
Leu 496	-	expression tag
Ser 497	-	expression tag
Lys 498	-	expression tag
Ile 499	-	expression tag
Tyr 500	-	expression tag
His 501	-	expression tag
Ile 502	-	expression tag
Glu 503	-	expression tag
Asn 504	-	expression tag
Glu 505	-	expression tag
Ile 506	-	expression tag
Ala 507	-	expression tag
Arg 508	-	expression tag
Ile 509	-	expression tag
Lys 510	-	expression tag
Lys 511	-	expression tag
Leu 512	-	expression tag
Ile 513	-	expression tag
Gly 514	-	expression tag
Glu 515	-	expression tag
Gly 516	-	expression tag
Gly 517	-	expression tag
Ser 518	-	expression tag
Gly 519	-	expression tag
Gly 520	-	expression tag
Ser 521	-	expression tag
Gly 522	-	expression tag
Leu 523	-	expression tag
Asn 524	-	expression tag
Asp 525	-	expression tag
Ile 526	-	expression tag
Phe 527	-	expression tag
Glu 528	-	expression tag
Ala 529	-	expression tag
Gln 530	-	expression tag
Lys 531	-	expression tag
Ile 532	-	expression tag
Glu 533	-	expression tag
Trp 534	-	expression tag
His 535	-	expression tag
Glu 536	-	expression tag
Gly 537	-	expression tag
Arg 538	-	expression tag
Thr 539	-	expression tag
Lys 540	-	expression tag
His 541	-	expression tag
His 542	-	expression tag
His 543	-	expression tag
His 544	-	expression tag
His 545	-	expression tag
His 546	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	9
	Total formula weight	257098.4
Branched	Number of molecules	6
	Total formula weight	3519.2
Non-Polymers*	Number of molecules	6
	Total formula weight	1327.2
All*	Total formula weight	261944.9

*Water molecules are not included.