9CHK
Structure of the alpha-N-methyltransferase (SonM) and RiPP precursor (SonA-Y62A) heteromeric complex (bound to SAM)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | TP-methylase family protein | polymer | 263 | 29068.3 | 2 | UniProt (Q8EGW3) Pfam (PF00590) | Shewanella oneidensis | |
| 2 | B, D (B, D) | Extradiol ring-cleavage dioxygenase LigAB LigA subunit domain-containing protein | polymer | 78 | 8690.6 | 2 | UniProt (Q8EGW2) Pfam (PF07746) | Shewanella oneidensis | |
| 3 | E, G (A, C) | S-ADENOSYLMETHIONINE | non-polymer | 398.4 | 2 | Chemie (SAM) PubChem (5136) PubChem (34755) PubChem (58633578) PubChem (60038769) PubChem (58766358) PubChem (73897310) PubChem (9865603) PubChem (87224684) PubChem (12312798) PubChem (131697735) PubChem (145712080) PubChem (132988922) PubChem (134692588) PubChem (135030730) PubChem (140459785) PubChem (163046094) | Shewanella oneidensis | ||
| 4 | F, H (A, C) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) PubChem (753) | Shewanella oneidensis | ||
| 5 | I, J, K, L (A, B, C, D) | water | water | 18.0 | 346 | Chemie (HOH) |
Sequence modifications
B, D: 1 - 71 (UniProt: Q8EGW2)
| PDB | External Database | Details |
|---|---|---|
| Met -6 | - | initiating methionine |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
| Ala 62 | Tyr 62 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 75517.8 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 981.1 | |
| All* | Total formula weight | 76498.9 |
