9CH3
Structure of the alpha-N-methyltransferase (SonM) and RiPP precursor (SonA-L63D) heteromeric complex (bound to SAH)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E, G (A, C, H, J) | TP-methylase family protein | polymer | 263 | 29068.3 | 4 | UniProt (Q8EGW3) Pfam (PF00590) | Shewanella oneidensis | |
2 | B (B) | Extradiol ring-cleavage dioxygenase LigAB LigA subunit domain-containing protein | polymer | 78 | 8798.6 | 1 | UniProt (Q8EGW2) | Shewanella oneidensis | |
3 | D, F, H (D, I, K) | Extradiol ring-cleavage dioxygenase LigAB LigA subunit domain-containing protein | polymer | 78 | 8784.6 | 3 | UniProt (Q8EGW2) | Shewanella oneidensis | |
4 | I, K, L, N (A, C, H, J) | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 4 | Chemie (SAH) | |||
5 | J, M (A, H) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
6 | O, P, Q, R, S... (A, B, C, D, H...) | water | water | 18.0 | 183 | Chemie (HOH) |
Sequence modifications
B: 1 - 71 (UniProt: Q8EGW2)
D, I, K: 1 - 71 (UniProt: Q8EGW2)
PDB | External Database | Details |
---|---|---|
Met -6 | - | initiating methionine |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
Asp 63 | Leu 63 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Met -6 | - | initiating methionine |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
Asp 63 | Leu 63 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 151425.8 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 1668.5 | |
All* | Total formula weight | 153094.2 |