9CH2
Structure of the alpha-N-methyltransferase (SonM) and RiPP precursor (SonA-L63D) heteromeric complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | TP-methylase family protein | polymer | 262 | 28955.2 | 1 | UniProt (Q8EGW3) Pfam (PF00590) | Shewanella oneidensis | |
2 | B, D (B, D) | Extradiol ring-cleavage dioxygenase LigAB LigA subunit domain-containing protein | polymer | 78 | 8784.6 | 2 | UniProt (Q8EGW2) | Shewanella oneidensis | |
3 | C (C) | TP-methylase family protein | polymer | 263 | 29068.3 | 1 | UniProt (Q8EGW3) Pfam (PF00590) | Shewanella oneidensis | |
4 | E (A) | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 1 | Chemie (SAH) | Shewanella oneidensis | ||
5 | F (C) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
6 | G, H, I, J (A, B, C, D) | water | water | 18.0 | 127 | Chemie (HOH) |
Sequence modifications
A: 1 - 261 (UniProt: Q8EGW3)
B, D: 1 - 71 (UniProt: Q8EGW2)
PDB | External Database | Details |
---|---|---|
Gly 262 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met -6 | - | initiating methionine |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
Asp 63 | Leu 63 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 75592.7 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 449.8 | |
All* | Total formula weight | 76042.5 |