9CBN
HAstV1 spike in complex with neutralizing Fabs 3H4 and 3B4
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | HAstV1 neutralizing Fab 3B4 heavy chain | polymer | 225 | 24231.2 | 1 | Mus musculus (mouse) | ||
| 2 | B (B) | HAstV1 neutralizing Fab 3B4 kappa chain | polymer | 214 | 23420.8 | 1 | Mus musculus (mouse) | ||
| 3 | C, D (C, D) | Structural protein | polymer | 228 | 25231.7 | 2 | UniProt (Q82452) Pfam (PF12226) UniProt (by SIFTS) (O12792) | Human astrovirus 1 | spike |
| 4 | E, G (E, G) | HAstV1 neutralizing Fab 3H4 heavy chain | polymer | 228 | 24436.5 | 2 | Mus musculus (mouse) | ||
| 5 | F, H (F, H) | HAstV1 neutralizing Fab 3H4 lambda chain | polymer | 217 | 23275.8 | 2 | Mus musculus (mouse) | ||
| 6 | I, J (I, J) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
| 7 | K (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
C, D: 429 - 645 (UniProt: Q82452)
| PDB | External Database | Details |
|---|---|---|
| Met 428 | - | initiating methionine |
| Ala 646 | - | expression tag |
| Ala 647 | - | expression tag |
| Ala 648 | - | expression tag |
| Glu 649 | - | expression tag |
| Leu 650 | - | expression tag |
| Ala 651 | - | expression tag |
| Leu 652 | - | expression tag |
| Val 653 | - | expression tag |
| Pro 654 | - | expression tag |
| Arg 655 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 193540.0 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1173.1 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 221.2 | |
| All* | Total formula weight | 194934.3 |
