9BUX

Structure of GGCX-BGP-menaquinone-4 epoxide complex

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (A)	Vitamin K-dependent gamma-carboxylase	polymer	766	88652.6	1	UniProt (P38435) Pfam (PF05090) Pfam (PF22777)	Homo sapiens (human)	Gamma-glutamyl carboxylase,Peptidyl-glutamate 4-carboxylase,Vitamin K gamma glutamyl carboxylase
2	B (B)	Osteocalcin	polymer	106	11804.4	1	UniProt (P02818)	Homo sapiens (human)	Bone Gla protein,BGP,Gamma-carboxyglutamic acid-containing protein
3	C (d)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	1	In PDB GlyTouCan (G42666HT)
4	D, E (A)	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	2	Chemie (NAG)
5	F (A)	CHOLESTEROL	non-polymer		386.7	1	Chemie (CLR)
6	G (A)	(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate	non-polymer		760.1	1	Chemie (POV)
7	H (A)	(1aR,7aS)-1a-methyl-7a-[(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl]-1a,7a-dihydronaphtho[2,3-b]oxirene-2,7-dione	non-polymer		460.6	1	Chemie (A1AT1)

Sequence modifications

A: 1 - 758 (UniProt: P38435)

PDB	External Database	Details
Asp 759	-	expression tag
Tyr 760	-	expression tag
Lys 761	-	expression tag
Asp 762	-	expression tag
Asp 763	-	expression tag
Asp 764	-	expression tag
Asp 765	-	expression tag
Lys 766	-	expression tag

B: 1 - 100 (UniProt: P02818)

PDB	External Database	Details
His 101	-	expression tag
His 102	-	expression tag
His 103	-	expression tag
His 104	-	expression tag
His 105	-	expression tag
His 106	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	100457.0
Branched	Number of molecules	1
	Total formula weight	424.4
Non-Polymers*	Number of molecules	5
	Total formula weight	2049.8
All*	Total formula weight	102931.2

*Water molecules are not included.