9BSB
Global reconstruction of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (B) | Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | polymer | 348 | 38146.7 | 1 | UniProt (P62873) Pfam (PF00400) | Homo sapiens (human) | Transducin beta chain 1 |
2 | B (C) | Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | polymer | 71 | 7861.1 | 1 | UniProt (P59768) Pfam (PF00631) | Homo sapiens (human) | G gamma-I |
3 | C (R) | Soluble cytochrome b562,D(2) dopamine receptor | polymer | 588 | 67234.6 | 1 | UniProt (P0ABE7) UniProt (P14416) Pfam (PF07361) Pfam (PF00001) | Escherichia coli | Cytochrome b-562,Dopamine D2 receptor |
4 | D (E) | Single chain Fab 16 (scFv16) | polymer | 268 | 28674.9 | 1 | Mus musculus | ||
5 | E (A) | Guanine nucleotide-binding protein G(o) subunit alpha | polymer | 354 | 40221.6 | 1 | UniProt (P09471) Pfam (PF00503) | Homo sapiens (human) | |
6 | F (R) | (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide | non-polymer | 323.4 | 1 | Chemie (7LD) |
Sequence modifications
B: 2 - 340 (UniProt: P62873)
R: -116 - -12 (UniProt: P0ABE7)
R: 1 - 443 (UniProt: P14416)
A: 1 - 354 (UniProt: P09471)
PDB | External Database | Details |
---|---|---|
Met -4 | - | initiating methionine |
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
Leu -1 | - | expression tag |
Leu 0 | - | expression tag |
Gln 1 | - | expression tag |
Gly 341 | - | expression tag |
Ser 342 | - | expression tag |
Ser 343 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Asp -144 | - | expression tag |
Tyr -143 | - | expression tag |
Lys -142 | - | expression tag |
Asp -141 | - | expression tag |
Asp -140 | - | expression tag |
Asp -139 | - | expression tag |
Asp -138 | - | expression tag |
Ala -137 | - | expression tag |
Lys -136 | - | expression tag |
Leu -135 | - | expression tag |
Gln -134 | - | expression tag |
Thr -133 | - | expression tag |
Met -132 | - | expression tag |
His -131 | - | expression tag |
His -130 | - | expression tag |
His -129 | - | expression tag |
His -128 | - | expression tag |
His -127 | - | expression tag |
His -126 | - | expression tag |
His -125 | - | expression tag |
His -124 | - | expression tag |
His -123 | - | expression tag |
His -122 | - | expression tag |
His -121 | - | expression tag |
His -120 | - | expression tag |
His -119 | - | expression tag |
His -118 | - | expression tag |
His -117 | - | expression tag |
Trp -110 | Met 29 | conflict |
Ile -15 | His 124 | conflict |
Leu -11 | - | linker |
Ala -10 | - | linker |
Ser -9 | - | linker |
Glu -8 | - | linker |
Asn -7 | - | linker |
Leu -6 | - | linker |
Tyr -5 | - | linker |
Phe -4 | - | linker |
Gln -3 | - | linker |
Gly -2 | - | linker |
Gly -1 | - | linker |
Thr 0 | - | linker |
A: 1 - 354 (UniProt: P09471)
PDB | External Database | Details |
---|---|---|
Asp 9 | Glu 9 | conflict |
Lys 10 | Arg 10 | conflict |
Val 13 | Leu 13 | conflict |
Met 18 | Ala 18 | conflict |
Asp 42 | Gly 42 | conflict |
Asn 43 | Glu 43 | conflict |
Asp 227 | Ala 227 | conflict |
Asp 230 | Gly 230 | conflict |
Ala 332 | Ile 332 | conflict |
Ile 335 | Val 335 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 182138.9 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 323.4 | |
All* | Total formula weight | 182462.3 |