9BRY
V0-only V-ATPase in synaptophysin gene knock-out mouse brain isolated synaptic vesicles
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (c) | V-type proton ATPase subunit S1 | polymer | 463 | 51046.2 | 1 | UniProt (Q9R1Q9) Pfam (PF05827) Pfam (PF20520) | Mus musculus (house mouse) | V-ATPase subunit S1,Protein C7-1,V-ATPase Ac45 subunit,V-ATPase S1 accessory protein,Vacuolar proton pump subunit S1 |
| 2 | B (b) | V-type proton ATPase 21 kDa proteolipid subunit c'' | polymer | 205 | 21618.6 | 1 | UniProt (Q91V37) Pfam (PF00137) | Mus musculus (house mouse) | V-ATPase 21 kDa proteolipid subunit c'',23 kDa subunit of V-ATPase,Vacuolar proton pump 21 kDa proteolipid subunit c'' |
| 3 | C (d) | V-type proton ATPase subunit d 1 | polymer | 351 | 40341.9 | 1 | UniProt (P51863) Pfam (PF01992) | Mus musculus (house mouse) | V-ATPase subunit d 1,P39,Physophilin,V-ATPase 40 kDa accessory protein,V-ATPase AC39 subunit,Vacuolar proton pump subunit d 1 |
| 4 | D (f) | Ribonuclease kappa | polymer | 98 | 11000.0 | 1 | UniProt (Q8K3C0) | Mus musculus (house mouse) | RNase K,RNase kappa,V-type proton ATPase subunit f,V-ATPase subunit f |
| 5 | E, F, G, H, I... (g, h, i, j, k...) | V-type proton ATPase 16 kDa proteolipid subunit c | polymer | 155 | 15815.8 | 9 | UniProt (P63082) Pfam (PF00137) | Mus musculus (house mouse) | V-ATPase 16 kDa proteolipid subunit c,PL16,Vacuolar proton pump 16 kDa proteolipid subunit c |
| 6 | N (p) | Renin receptor cytoplasmic fragment | polymer | 290 | 32751.4 | 1 | UniProt (Q9CYN9) Pfam (PF07850) | Mus musculus (house mouse) | |
| 7 | O (e) | V-type proton ATPase subunit e 2 | polymer | 81 | 9203.0 | 1 | UniProt (Q91XE7) Pfam (PF05493) | Mus musculus (house mouse) | V-ATPase subunit e 2,Vacuolar proton pump subunit e 2 |
| 8 | P (a) | V-type proton ATPase 116 kDa subunit a 1 | polymer | 838 | 96442.5 | 1 | UniProt (Q9Z1G4) Pfam (PF01496) | Mus musculus (house mouse) | V-ATPase 116 kDa subunit a 1,Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit,Vacuolar adenosine triphosphatase subunit Ac116,Vacuolar proton pump subunit 1,Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 |
| 9 | Q (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 627.6 | 1 | In PDB GlyTouCan (G47362BJ) | |||
| 10 | R, S (B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 11 | T, V, W, X (c) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
| 12 | U (c) | beta-D-mannopyranose | non-polymer | 180.2 | 1 | Chemie (BMA) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 404746.1 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 1476.4 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 1065.0 | |
| All* | Total formula weight | 407287.5 |
