9BRY

V0-only V-ATPase in synaptophysin gene knock-out mouse brain isolated synaptic vesicles

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	c	V-type proton ATPase subunit S1	polymer	463	51046.2	1	UniProt (Q9R1Q9) Pfam (PF05827) Pfam (PF20520) In PDB	Mus musculus (house mouse)	V-ATPase subunit S1,Protein C7-1,V-ATPase Ac45 subunit,V-ATPase S1 accessory protein,Vacuolar proton pump subunit S1
2	b	V-type proton ATPase 21 kDa proteolipid subunit c''	polymer	205	21618.6	1	UniProt (Q91V37) Pfam (PF00137) In PDB	Mus musculus (house mouse)	V-ATPase 21 kDa proteolipid subunit c'',23 kDa subunit of V-ATPase,Vacuolar proton pump 21 kDa proteolipid subunit c''
3	d	V-type proton ATPase subunit d 1	polymer	351	40341.9	1	UniProt (P51863) Pfam (PF01992) In PDB	Mus musculus (house mouse)	V-ATPase subunit d 1,P39,Physophilin,V-ATPase 40 kDa accessory protein,V-ATPase AC39 subunit,Vacuolar proton pump subunit d 1
4	f	Ribonuclease kappa	polymer	98	11000.0	1	UniProt (Q8K3C0) In PDB	Mus musculus (house mouse)	RNase K,RNase kappa,V-type proton ATPase subunit f,V-ATPase subunit f
5	g, h, i, j, k...	V-type proton ATPase 16 kDa proteolipid subunit c	polymer	155	15815.8	9	UniProt (P63082) Pfam (PF00137) In PDB	Mus musculus (house mouse)	V-ATPase 16 kDa proteolipid subunit c,PL16,Vacuolar proton pump 16 kDa proteolipid subunit c
6	p	Renin receptor cytoplasmic fragment	polymer	290	32751.4	1	UniProt (Q9CYN9) Pfam (PF07850) In PDB	Mus musculus (house mouse)
7	e	V-type proton ATPase subunit e 2	polymer	81	9203.0	1	UniProt (Q91XE7) Pfam (PF05493) In PDB	Mus musculus (house mouse)	V-ATPase subunit e 2,Vacuolar proton pump subunit e 2
8	a	V-type proton ATPase 116 kDa subunit a 1	polymer	838	96442.5	1	UniProt (Q9Z1G4) Pfam (PF01496) In PDB	Mus musculus (house mouse)	V-ATPase 116 kDa subunit a 1,Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit,Vacuolar adenosine triphosphatase subunit Ac116,Vacuolar proton pump subunit 1,Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1
9	A	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		627.6	1	In PDB GlyTouCan (G47362BJ)
10	B, C	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	2	In PDB GlyTouCan (G42666HT)
11	c	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	4	Chemie (NAG)
12	c	beta-D-mannopyranose	non-polymer		180.2	1	Chemie (BMA)

Contents of the asymmetric unit

Polymers	Number of chains	16
	Total formula weight	404746.1
Branched	Number of molecules	3
	Total formula weight	1476.4
Non-Polymers*	Number of molecules	5
	Total formula weight	1065.0
All*	Total formula weight	407287.5

*Water molecules are not included.