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9BRA

Intact V-ATPase State 2 and synaptophysin complex in mouse brain isolated synaptic vesicles

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, E
(8, 9, Q)
V-type proton ATPase subunit E 1polymer22626196.43UniProt (P50518)
Pfam (PF01991)
Mus musculus (house mouse)V-ATPase subunit E 1,V-ATPase 31 kDa subunit,p31,Vacuolar proton pump subunit E 1
2B, D, F
(R, T, V)
V-type proton ATPase subunit G 2polymer11813674.53UniProt (Q9WTT4)
Pfam (PF03179)
Mus musculus (house mouse)V-ATPase subunit G 2,V-ATPase 13 kDa subunit 2,Vacuolar proton pump subunit G 2
3G, H, I
(0, 1, 2)
V-type proton ATPase catalytic subunit Apolymer61768402.93UniProt (P50516)
Pfam (PF02874)
Pfam (PF16886)
Pfam (PF00006)
Pfam (PF22919)
Mus musculus (house mouse)V-ATPase subunit A,V-ATPase 69 kDa subunit,Vacuolar proton pump subunit alpha
4J, K, L
(3, 4, 5)
V-type proton ATPase subunit B, brain isoformpolymer51156611.63UniProt (P62814)
Pfam (PF02874)
Pfam (PF00006)
Pfam (PF22919)
Mus musculus (house mouse)V-ATPase subunit B 2,Endomembrane proton pump 58 kDa subunit,Vacuolar proton pump subunit B 2
5M
(6)
V-type proton ATPase subunit C 1polymer38243945.41UniProt (Q9Z1G3)
Pfam (PF03223)
Mus musculus (house mouse)V-ATPase subunit C 1,Vacuolar proton pump subunit C 1
6N
(7)
V-type proton ATPase subunit Dpolymer24728419.11UniProt (P57746)
Pfam (PF01813)
Mus musculus (house mouse)V-ATPase subunit D,V-ATPase 28 kDa accessory protein,Vacuolar proton pump subunit D
7O
(U)
V-type proton ATPase subunit Hpolymer48355922.91UniProt (Q8BVE3)
Pfam (PF03224)
Pfam (PF11698)
Mus musculus (house mouse)V-ATPase subunit H,Vacuolar proton pump subunit H
8P
(X)
V-type proton ATPase subunit Fpolymer11913389.31UniProt (Q9D1K2)
Pfam (PF01990)
Mus musculus (house mouse)V-ATPase subunit F,V-ATPase 14 kDa subunit,Vacuolar proton pump subunit F
9Q
(a)
V-type proton ATPase 116 kDa subunit a 1polymer83896442.51UniProt (Q9Z1G4)
Pfam (PF01496)
Mus musculus (house mouse)V-ATPase 116 kDa subunit a 1,Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit,Vacuolar adenosine triphosphatase subunit Ac116,Vacuolar proton pump subunit 1,Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1
10R
(b)
V-type proton ATPase 21 kDa proteolipid subunit c''polymer20521618.61UniProt (Q91V37)
Pfam (PF00137)
Mus musculus (house mouse)V-ATPase 21 kDa proteolipid subunit c'',23 kDa subunit of V-ATPase,Vacuolar proton pump 21 kDa proteolipid subunit c''
11S
(d)
V-type proton ATPase subunit d 1polymer35140341.91UniProt (P51863)
Pfam (PF01992)
Mus musculus (house mouse)V-ATPase subunit d 1,P39,Physophilin,V-ATPase 40 kDa accessory protein,V-ATPase AC39 subunit,Vacuolar proton pump subunit d 1
12AA, BA, T, U, V...
(g, h, i, j, k...)
V-type proton ATPase 16 kDa proteolipid subunit cpolymer15515815.89UniProt (P63082)
Pfam (PF00137)
Mus musculus (house mouse)V-ATPase 16 kDa proteolipid subunit c,PL16,Vacuolar proton pump 16 kDa proteolipid subunit c
13CA
(p)
Renin receptor cytoplasmic fragmentpolymer35039128.81UniProt (Q9CYN9)
Pfam (PF07850)
Mus musculus (house mouse)
14DA
(c)
V-type proton ATPase subunit S1polymer46351046.21UniProt (Q9R1Q9)
Pfam (PF05827)
Pfam (PF20520)
Mus musculus (house mouse)V-ATPase subunit S1,Protein C7-1,V-ATPase Ac45 subunit,V-ATPase S1 accessory protein,Vacuolar proton pump subunit S1
15EA
(f)
Ribonuclease kappapolymer9811000.01UniProt (Q8K3C0)Mus musculus (house mouse)RNase K,RNase kappa,V-type proton ATPase subunit f,V-ATPase subunit f
16FA
(s)
Synaptophysinpolymer31434045.41UniProt (Q62277)
Pfam (PF01284)
Mus musculus (house mouse)BM89 antigen,Major synaptic vesicle protein p38
17GA
(e)
V-type proton ATPase subunit e 2polymer819203.01UniProt (Q91XE7)
Pfam (PF05493)
Mus musculus (house mouse)V-ATPase subunit e 2,Vacuolar proton pump subunit e 2
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains33
Total formula weight1081501.7
All*Total formula weight1081501.7
*Water molecules are not included.

237423

PDB entries from 2025-06-11

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