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9BO4

Crystal Structure of T21I SARS-CoV-2 Main Protease in Complex with Nirmatrelvir

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
3C-like proteinasepolymer30633837.62UniProt (P0DTC1)
Pfam (PF05409)
Severe acute respiratory syndrome coronavirus 23CL-PRO, 3CLp, Main protease, Mpro, Non-structural protein 5, nsp5, SARS coronavirus main proteinase
2C, D
(A, B)
(1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamidenon-polymer501.52Chemie (4WI)
3E, F
(A, B)
waterwater18.057Chemie (HOH)
Sequence modifications
A, B: 1 - 306 (UniProt: P0DTC1)
PDBExternal DatabaseDetails
Ile 21Thr 3284engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight67675.2
Non-Polymers*Number of molecules2
Total formula weight1003.1
All*Total formula weight68678.3
*Water molecules are not included.

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PDB entries from 2025-10-29

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