9BLL
Cryo-EM of RBD(EG5.1)/1301B7 Fab Complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (H) | 1301B7 Heavy Chain | polymer | 128 | 13768.4 | 1 | Homo sapiens | ||
| 2 | B (L) | 1301B7 Light Chain | polymer | 110 | 11517.8 | 1 | Homo sapiens | ||
| 3 | C (T) | Spike glycoprotein | polymer | 1244 | 137934.1 | 1 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) | Severe acute respiratory syndrome coronavirus 2 | S glycoprotein,E2,Peplomer protein |
| 4 | D (G) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 5 | E (T) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
T: 28 - 1210 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Met 7 | - | initiating methionine |
| Arg 8 | - | expression tag |
| Pro 9 | - | expression tag |
| Thr 10 | - | expression tag |
| Leu 11 | - | expression tag |
| Leu 12 | - | expression tag |
| Trp 13 | - | expression tag |
| Ser 14 | - | expression tag |
| Leu 15 | - | expression tag |
| Leu 16 | - | expression tag |
| Leu 17 | - | expression tag |
| Leu 18 | - | expression tag |
| Leu 19 | - | expression tag |
| Gly 20 | - | expression tag |
| Val 21 | - | expression tag |
| Phe 22 | - | expression tag |
| Ala 23 | - | expression tag |
| Ala 24 | - | expression tag |
| Ala 25 | - | expression tag |
| Ala 26 | - | expression tag |
| Ala 27 | - | expression tag |
| His 53 | Gln 52 | conflict |
| Ala 84 | Val 83 | conflict |
| Asp 143 | Gly 142 | conflict |
| - | Tyr 144 | deletion |
| Gln 146 | His 146 | conflict |
| Glu 183 | Gln 183 | conflict |
| Glu 213 | Val 213 | conflict |
| Val 252 | Gly 252 | conflict |
| His 339 | Gly 339 | conflict |
| Thr 346 | Arg 346 | conflict |
| Ile 368 | Leu 368 | conflict |
| Phe 371 | Ser 371 | conflict |
| Pro 373 | Ser 373 | conflict |
| Phe 375 | Ser 375 | conflict |
| Ala 376 | Thr 376 | conflict |
| Asn 405 | Asp 405 | conflict |
| Ser 408 | Arg 408 | conflict |
| Asn 417 | Lys 417 | conflict |
| Pro 445 | Val 445 | conflict |
| Ser 446 | Gly 446 | conflict |
| Leu 456 | Phe 456 | conflict |
| Lys 460 | Asn 460 | conflict |
| Asn 477 | Ser 477 | conflict |
| Lys 478 | Thr 478 | conflict |
| Ala 484 | Glu 484 | conflict |
| Pro 486 | Phe 486 | conflict |
| Ser 490 | Phe 490 | conflict |
| Arg 498 | Gln 498 | conflict |
| Tyr 501 | Asn 501 | conflict |
| His 505 | Tyr 505 | conflict |
| Gly 614 | Asp 614 | conflict |
| Tyr 655 | His 655 | conflict |
| Lys 679 | Asn 679 | conflict |
| His 681 | Pro 681 | conflict |
| Gly 682 | Arg 682 | conflict |
| Ser 683 | Arg 683 | conflict |
| Gly 685 | Arg 685 | conflict |
| Lys 764 | Asn 764 | conflict |
| Tyr 796 | Asp 796 | conflict |
| Pro 817 | Phe 817 | conflict |
| Pro 892 | Ala 892 | conflict |
| Pro 899 | Ala 899 | conflict |
| Pro 942 | Ala 942 | conflict |
| His 954 | Gln 954 | conflict |
| Lys 969 | Asn 969 | conflict |
| Pro 986 | Lys 986 | conflict |
| Pro 987 | Val 987 | conflict |
| Ala 1211 | - | expression tag |
| Ser 1212 | - | expression tag |
| Ser 1213 | - | expression tag |
| Gly 1214 | - | expression tag |
| Tyr 1215 | - | expression tag |
| Ile 1216 | - | expression tag |
| Pro 1217 | - | expression tag |
| Glu 1218 | - | expression tag |
| Ala 1219 | - | expression tag |
| Pro 1220 | - | expression tag |
| Arg 1221 | - | expression tag |
| Asp 1222 | - | expression tag |
| Gly 1223 | - | expression tag |
| Gln 1224 | - | expression tag |
| Ala 1225 | - | expression tag |
| Tyr 1226 | - | expression tag |
| Val 1227 | - | expression tag |
| Arg 1228 | - | expression tag |
| Lys 1229 | - | expression tag |
| Asp 1230 | - | expression tag |
| Gly 1231 | - | expression tag |
| Glu 1232 | - | expression tag |
| Trp 1233 | - | expression tag |
| Val 1234 | - | expression tag |
| Leu 1235 | - | expression tag |
| Leu 1236 | - | expression tag |
| Ser 1237 | - | expression tag |
| Thr 1238 | - | expression tag |
| Phe 1239 | - | expression tag |
| Leu 1240 | - | expression tag |
| Glu 1241 | - | expression tag |
| Gly 1242 | - | expression tag |
| Thr 1243 | - | expression tag |
| Lys 1244 | - | expression tag |
| His 1245 | - | expression tag |
| His 1246 | - | expression tag |
| His 1247 | - | expression tag |
| His 1248 | - | expression tag |
| His 1249 | - | expression tag |
| His 1250 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 163220.2 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 424.4 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 221.2 | |
| All* | Total formula weight | 163865.8 |






