9BGK
Structure of V.cholera DdmDE (2D:1E) in complex with DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | guide DNA | polymer | 12 | 3767.5 | 1 | Vibrio cholerae | ||
| 2 | B (B) | complementary target DNA | polymer | 25 | 7594.9 | 1 | Vibrio cholerae | ||
| 3 | C (C) | non-complementary target DNA (long) | polymer | 26 | 8093.2 | 1 | Vibrio cholerae | ||
| 4 | D (D) | non-complementary target DNA (short) | polymer | 12 | 3702.4 | 1 | Vibrio cholerae | ||
| 5 | E (E) | DdmE | polymer | 687 | 79195.9 | 1 | UniProt (A0A0H6MQD2) UniProt (by SIFTS) (Q9KR73) | Vibrio cholerae | |
| 6 | F, G (F, G) | Helicase/UvrB N-terminal domain-containing protein | polymer | 1190 | 136155.3 | 2 | UniProt (B9TSM3) UniProt (by SIFTS) (Q9KR72) | Vibrio cholerae | DdmD |
| 7 | H (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) |
Sequence modifications
F, G: 1 - 1190 (UniProt: B9TSM3)
| PDB | External Database | Details |
|---|---|---|
| Pro 29 | Ser 59 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 7 |
| Total formula weight | 374664.6 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 24.3 | |
| All* | Total formula weight | 374688.9 |
