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9BFZ

Tri-complex of Compound-5, KRAS G12C, and CypA

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(B, A)
GTPase KRaspolymer17019382.82UniProt (P01116)
Pfam (PF00071)
Homo sapiens (human)K-Ras 2,Ki-Ras,c-K-ras,c-Ki-ras
2C, D
(C, D)
Peptidyl-prolyl cis-trans isomerase Apolymer16618107.52UniProt (P62937)
Pfam (PF00160)
Homo sapiens (human)PPIase A,Cyclophilin A,Cyclosporin A-binding protein,Rotamase A
3E, H
(B, A)
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERnon-polymer522.22Chemie (GNP)
4F, I
(B, A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5G, J
(B, A)
(3R)-N-[(2S)-1-{[(1M,8R,10S,14S,21M)-22-ethyl-4-hydroxy-21-[2-(2-methoxyethyl)phenyl]-18,18-dimethyl-9,15-dioxo-16-oxa-10,22,28-triazapentacyclo[18.5.2.1~2,6~.1~10,14~.0~23,27~]nonacosa-1(25),2(29),3,5,20,23,26-heptaen-8-yl]amino}-3-methyl-1-oxobutan-2-yl]-N-methyl-1-propanoylpyrrolidine-3-carboxamide (non-preferred name)non-polymer905.12Chemie (A1AOK)
6K, L, M, N
(B, A, C, D)
waterwater18.01032Chemie (HOH)
Sequence modifications
B, A: 1 - 169 (UniProt: P01116)
PDBExternal DatabaseDetails
Ser 0-expression tag
Cys 12Gly 12engineered mutation
Ser 51Cys 51conflict
Leu 80Cys 80conflict
Ser 118Cys 118conflict
C, D: 1 - 165 (UniProt: P62937)
PDBExternal DatabaseDetails
Ser 0-expression tag
Ser 52Cys 52conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight74980.7
Non-Polymers*Number of molecules6
Total formula weight2903.3
All*Total formula weight77883.9
*Water molecules are not included.

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PDB entries from 2026-01-28

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