9BE9
HIV-1 Env 16055 dGly4 NFL
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Envelope glycoprotein gp140 | polymer | 638 | 71212.6 | 3 | UniProt (A1EAI1) Pfam (PF00516) Pfam (PF00517) | Human immunodeficiency virus 1 | Env polyprotein |
| 2 | D, E, F, H, I... (D, E, F, H, I...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 15 | In PDB GlyTouCan (G42666HT) | |||
| 3 | G, M, S (G, M, S) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 3 | In PDB GlyTouCan (G56014GC) | |||
| 4 | AA, BA, CA, DA, EA... (A, B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 30 | Chemie (NAG) |
Sequence modifications
A, B, C: 31 - 664 (UniProt: A1EAI1)
| PDB | External Database | Details |
|---|---|---|
| Asp 47 | Glu 44 | engineered mutation |
| Glu 49 | Lys 46 | engineered mutation |
| Lys 65 | Val 62 | engineered mutation |
| Thr 106 | Glu 103 | engineered mutation |
| Leu 165 | Ile 159 | engineered mutation |
| Cys 201 | Ile 199 | engineered mutation |
| Gln 276 | Asn 274 | engineered mutation |
| Gln 301 | Asn 299 | engineered mutation |
| Tyr 302 | Asn 300 | engineered mutation |
| Met 320 | Thr 316 | engineered mutation |
| Ser 334 | Lys 331 | engineered mutation |
| Gln 359 | Asn 356 | engineered mutation |
| Arg 429 | Glu 424 | engineered mutation |
| Gln 432 | Arg 427 | engineered mutation |
| Cys 433 | Ala 428 | engineered mutation |
| Gln 463 | Asn 458 | engineered mutation |
| Arg 500 | Ala 495 | engineered mutation |
| Gly 503 | - | insertion |
| Gly 503 | - | insertion |
| Gly 503 | - | insertion |
| Gly 503 | - | insertion |
| Ser 503 | - | insertion |
| Gly 503 | - | insertion |
| Gly 503 | Arg 503 | engineered mutation |
| Gly 503 | Glu 504 | engineered mutation |
| Gly 503 | Lys 505 | engineered mutation |
| Ser 503 | Arg 506 | engineered mutation |
| Arg 503 | Ile 514 | engineered mutation |
| Arg 520 | Phe 515 | engineered mutation |
| Pro 559 | Ile 554 | engineered mutation |
| Gly 569 | Thr 564 | engineered mutation |
| Gly 636 | Ser 631 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 213637.8 | |
| Branched | Number of molecules | 18 |
| Total formula weight | 9584.9 | |
| Non-Polymers* | Number of molecules | 30 |
| Total formula weight | 6636.2 | |
| All* | Total formula weight | 229858.9 |
