9B8U
Crystal structure of CRX-Ret4 oligonucleotide complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Cone-rod homeobox protein | polymer | 81 | 9780.1 | 4 | UniProt (O43186) Pfam (PF00046) | Homo sapiens (human) | |
| 2 | E, G (E, G) | DNA (5'-D(P*CP*AP*GP*GP*AP*GP*CP*TP*TP*AP*GP*GP*AP*GP*GP*GP*GP*GP*AP*G)-3') | polymer | 21 | 6618.3 | 2 | Homo sapiens | ||
| 3 | F, H (F, H) | DNA (5'-D(P*CP*TP*CP*CP*CP*CP*CP*TP*CP*CP*TP*AP*AP*GP*CP*TP*CP*CP*TP*G)-3') | polymer | 21 | 6231.0 | 2 | Homo sapiens | ||
| 4 | I, L (A, E) | CACODYLATE ION | non-polymer | 137.0 | 2 | Chemie (CAC) | |||
| 5 | J (A) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 1 | Chemie (MPD) | |||
| 6 | K, N, R, S (B, F, H) | GLYCEROL | non-polymer | 92.1 | 4 | Chemie (GOL) | |||
| 7 | M, O, T (E, F, H) | POTASSIUM ION | non-polymer | 39.1 | 3 | Chemie (K) | |||
| 8 | P, Q (G) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 9 | AA, BA, U, V, W... (G, H, A, B, C...) | water | water | 18.0 | 55 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 31 - 107 (UniProt: O43186)
| PDB | External Database | Details |
|---|---|---|
| Gly 27 | - | expression tag |
| Ala 28 | - | expression tag |
| Met 29 | - | expression tag |
| Asp 30 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 64818.8 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 923.8 | |
| All* | Total formula weight | 65742.6 |
