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9B24

WT strain gidB mutant mycobacterial ribosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
RNA (1528-MER)polymer1528495373.71GenBank (2093960070)Mycolicibacterium smegmatis
2B
(C)
Small ribosomal subunit protein uS3polymer27530191.21UniProt (A0QSD7)
Pfam (PF07650)
Pfam (PF00189)
Mycolicibacterium smegmatis30S ribosomal protein S3
3C
(D)
Small ribosomal subunit protein uS4polymer20123415.81UniProt (A0QSL7)
Pfam (PF00163)
Pfam (PF01479)
Mycolicibacterium smegmatis30S ribosomal protein S4
4D
(E)
Small ribosomal subunit protein uS5polymer21421946.11UniProt (A0QSG6)
Pfam (PF00333)
Pfam (PF03719)
Mycolicibacterium smegmatis30S ribosomal protein S5
5E
(F)
Small ribosomal subunit protein bS6polymer9610991.61UniProt (A0A2U9Q0X2)
Pfam (PF01250)
UniProt (by SIFTS) (A0R7F9)
Mycolicibacterium smegmatis
6F
(G)
Small ribosomal subunit protein uS7polymer15617660.41UniProt (A0QS97)
Pfam (PF00177)
Mycolicibacterium smegmatis30S ribosomal protein S7
7G
(H)
Small ribosomal subunit protein uS8polymer13214492.61UniProt (A0QSG3)
Pfam (PF00410)
Mycolicibacterium smegmatis30S ribosomal protein S8
8H
(I)
Small ribosomal subunit protein uS9polymer15016794.41UniProt (A0QSP9)
Pfam (PF00380)
Mycolicibacterium smegmatis30S ribosomal protein S9
9I
(J)
Small ribosomal subunit protein uS10polymer10111454.31UniProt (A0QSD0)
Pfam (PF00338)
Mycolicibacterium smegmatis30S ribosomal protein S10
10J
(K)
Small ribosomal subunit protein uS11polymer13814671.81UniProt (A0QSL6)
Pfam (PF00411)
Mycolicibacterium smegmatis30S ribosomal protein S11
11K
(L)
Small ribosomal subunit protein uS12polymer12413896.41UniProt (A0QS96)
Pfam (PF00164)
Mycolicibacterium smegmatis30S ribosomal protein S12
12L
(M)
Small ribosomal subunit protein uS13polymer12414249.61UniProt (A0QSL5)
Pfam (PF00416)
Mycolicibacterium smegmatis30S ribosomal protein S13
13M
(N)
Small ribosomal subunit protein uS14Bpolymer616976.41UniProt (A0QSG2)
Pfam (PF00253)
Mycolicibacterium smegmatis30S ribosomal protein S14 type Z
14N
(O)
Small ribosomal subunit protein uS15polymer8910368.11UniProt (A0QVQ3)
Pfam (PF00312)
Mycolicibacterium smegmatis30S ribosomal protein S15
15O
(P)
Small ribosomal subunit protein bS16polymer15616795.21UniProt (A0QV37)
Pfam (PF00886)
Mycolicibacterium smegmatis30S ribosomal protein S16
16P
(Q)
Small ribosomal subunit protein uS17polymer9811127.01UniProt (A0QSE0)
Pfam (PF00366)
Mycolicibacterium smegmatis30S ribosomal protein S17
17Q
(R)
Small ribosomal subunit protein bS18Bpolymer849524.21UniProt (A0R7F7)
Pfam (PF01084)
Mycolicibacterium smegmatis30S ribosomal protein S18 2
18R
(T)
Small ribosomal subunit protein bS20polymer869556.11UniProt (A0R102)
Pfam (PF01649)
Mycolicibacterium smegmatis30S ribosomal protein S20
19S
(V)
Small ribosomal subunit protein uS2polymer27730145.21UniProt (A0QVB8)
Pfam (PF00318)
Mycolicibacterium smegmatis30S ribosomal protein S2
20T
(Y)
23S rRNApolymer31201012140.91GenBank (2198294598)Mycolicibacterium smegmatis
21U
(U)
5S rRNApolymer11838061.81GenBank (967054)Mycolicibacterium smegmatis
22V
(Z)
Large ribosomal subunit protein uL2polymer27830425.91UniProt (A0QSD4)
Pfam (PF00181)
Pfam (PF03947)
Mycolicibacterium smegmatis50S ribosomal protein L2
23W
(a)
Large ribosomal subunit protein uL3polymer21723011.41UniProt (A0QSD1)
Pfam (PF00297)
Mycolicibacterium smegmatis50S ribosomal protein L3
24X
(b)
Large ribosomal subunit protein uL4polymer21522920.91UniProt (A0QSD2)
Pfam (PF00573)
Mycolicibacterium smegmatis50S ribosomal protein L4
25Y
(c)
Large ribosomal subunit protein uL5polymer18721152.31UniProt (A0QSG1)
Pfam (PF00281)
Pfam (PF00673)
Mycolicibacterium smegmatis50S ribosomal protein L5
26Z
(d)
Large ribosomal subunit protein uL6polymer17919483.41UniProt (A0QSG4)
Pfam (PF00347)
Mycolicibacterium smegmatis50S ribosomal protein L6
27AA
(e)
Large ribosomal subunit protein uL11polymer14215023.41UniProt (A0QS45)
Pfam (PF03946)
Pfam (PF00298)
Mycolicibacterium smegmatis50S ribosomal protein L11
28BA
(f)
Large ribosomal subunit protein uL13polymer14716146.71UniProt (A0QSP8)
Pfam (PF00572)
Mycolicibacterium smegmatis50S ribosomal protein L13
29CA
(g)
Large ribosomal subunit protein uL14polymer12213400.61UniProt (A0QSF9)
Pfam (PF00238)
Mycolicibacterium smegmatis50S ribosomal protein L14
30DA
(h)
Large ribosomal subunit protein uL15polymer14715602.21UniProt (A0QSG8)
Pfam (PF00828)
Mycolicibacterium smegmatis
31EA
(i)
Large ribosomal subunit protein uL16polymer13815774.21UniProt (A0QSD8)
Pfam (PF00252)
Mycolicibacterium smegmatis50S ribosomal protein L16
32FA
(j)
Large ribosomal subunit protein bL17polymer19921892.21UniProt (A0QSL9)
Pfam (PF01196)
Mycolicibacterium smegmatis50S ribosomal protein L17
33GA
(k)
Large ribosomal subunit protein uL18polymer12713711.71UniProt (A0QSG5)
Pfam (PF00861)
Mycolicibacterium smegmatis
34HA
(l)
Large ribosomal subunit protein bL19polymer11312892.81UniProt (A0QV42)
Pfam (PF01245)
Mycolicibacterium smegmatis50S ribosomal protein L19
35IA
(m)
Large ribosomal subunit protein bL20polymer12914494.71UniProt (A0QYU6)
Pfam (PF00453)
Mycolicibacterium smegmatis50S ribosomal protein L20
36JA
(n)
Large ribosomal subunit protein bL21polymer10311055.91UniProt (A0R151)
Pfam (PF00829)
Mycolicibacterium smegmatis50S ribosomal protein L21
37KA
(o)
Large ribosomal subunit protein uL22polymer15316353.61UniProt (A0QSD6)
Pfam (PF00237)
Mycolicibacterium smegmatis50S ribosomal protein L22
38LA
(p)
Large ribosomal subunit protein uL23polymer10011047.81UniProt (A0QSD3)
Pfam (PF00276)
Mycolicibacterium smegmatis50S ribosomal protein L23
39MA
(q)
Large ribosomal subunit protein uL24polymer10511228.91UniProt (A0QSG0)
Pfam (PF00467)
Pfam (PF17136)
Mycolicibacterium smegmatis50S ribosomal protein L24
40NA
(r)
Large ribosomal subunit protein bL25polymer21522571.11UniProt (A0R3D2)
Pfam (PF01386)
Pfam (PF14693)
Mycolicibacterium smegmatisGeneral stress protein CTC
41OA
(s)
Large ribosomal subunit protein bL27polymer889249.61UniProt (A0R150)
Pfam (PF01016)
Mycolicibacterium smegmatis50S ribosomal protein L27
42PA
(t)
Large ribosomal subunit protein bL28polymer646891.01UniProt (A0QV03)
Pfam (PF00830)
Mycolicibacterium smegmatis
43QA
(u)
Large ribosomal subunit protein uL29polymer778790.91UniProt (A0QSD9)
Pfam (PF00831)
Mycolicibacterium smegmatis50S ribosomal protein L29
44RA
(v)
Large ribosomal subunit protein uL10polymer17518035.71UniProt (A0QS62)
Pfam (PF00466)
Mycolicibacterium smegmatis50S ribosomal protein L10
45SA
(w)
Large ribosomal subunit protein uL30polymer617022.11UniProt (A0QSG7)
Pfam (PF00327)
Mycolicibacterium smegmatis50S ribosomal protein L30
46TA
(x)
Large ribosomal subunit protein bL32polymer576467.71UniProt (A0R3I9)
Pfam (PF01783)
Mycolicibacterium smegmatis50S ribosomal protein L32
47UA
(y)
Large ribosomal subunit protein bL33Apolymer556468.51UniProt (A0QS39)
Pfam (PF00471)
Mycolicibacterium smegmatis50S ribosomal protein L33 1
48VA
(z)
Large ribosomal subunit protein bL34polymer475522.61UniProt (A0R7K0)
Pfam (PF00468)
Mycolicibacterium smegmatis50S ribosomal protein L34
49WA
(1)
Large ribosomal subunit protein bL35polymer647298.51UniProt (A0QYU7)
Pfam (PF01632)
Mycolicibacterium smegmatis50S ribosomal protein L35
50XA
(2)
50S ribosomal protein L36polymer374341.31UniProt (A0QSL4)
Pfam (PF00444)
Mycolicibacterium smegmatis
51YA
(4)
23S rRNA partpolymer8126249.51GenBank (4586628)Mycolicibacterium smegmatis
52AB, AC, AD, AE, AF...
(A, P, Y, U, y...)
MAGNESIUM IONnon-polymer24.3624Chemie (MG)
53BZ, DJ, DZ, YY, ZI
(y, R, 2, t, N)
ZINC IONnon-polymer65.45Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains51
Total formula weight2264360.3
Non-Polymers*Number of molecules629
Total formula weight15493.4
All*Total formula weight2279853.6
*Water molecules are not included.

239492

PDB entries from 2025-07-30

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