Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9B1Y

WT strain WT mycobacterial ribosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
16S rRNApolymer1511490126.81GenBank (2093960070)Mycolicibacterium smegmatis
2B
(C)
Small ribosomal subunit protein uS3polymer20823617.21UniProt (A0QSD7)
Pfam (PF07650)
Pfam (PF00189)
Mycolicibacterium smegmatis30S ribosomal protein S3
3C
(D)
Small ribosomal subunit protein uS4polymer20023284.61UniProt (A0QSL7)
Pfam (PF00163)
Pfam (PF01479)
Mycolicibacterium smegmatis30S ribosomal protein S4
4D
(E)
Small ribosomal subunit protein uS5polymer18018481.41UniProt (A0QSG6)
Pfam (PF00333)
Pfam (PF03719)
Mycolicibacterium smegmatis30S ribosomal protein S5
5E
(F)
Small ribosomal subunit protein bS6polymer9610991.61UniProt (A0A2U9Q0X2)
Pfam (PF01250)
UniProt (by SIFTS) (A0R7F9)
Mycolicibacterium smegmatis
6F
(G)
Small ribosomal subunit protein uS7polymer15517529.21UniProt (A0QS97)
Pfam (PF00177)
Mycolicibacterium smegmatis30S ribosomal protein S7
7G
(H)
Small ribosomal subunit protein uS8polymer13114361.41UniProt (A0QSG3)
Pfam (PF00410)
Mycolicibacterium smegmatis30S ribosomal protein S8
8H
(I)
Small ribosomal subunit protein uS9polymer12614093.41UniProt (A0QSP9)
Pfam (PF00380)
Mycolicibacterium smegmatis30S ribosomal protein S9
9I
(J)
Small ribosomal subunit protein uS10polymer9911252.01UniProt (A0QSD0)
Pfam (PF00338)
Mycolicibacterium smegmatis30S ribosomal protein S10
10J
(K)
Small ribosomal subunit protein uS11polymer11512151.71UniProt (A0QSL6)
Pfam (PF00411)
Mycolicibacterium smegmatis30S ribosomal protein S11
11K
(L)
Small ribosomal subunit protein uS12polymer12213678.11UniProt (A0QS96)
Pfam (PF00164)
Mycolicibacterium smegmatis30S ribosomal protein S12
12L
(M)
Small ribosomal subunit protein uS13polymer11613374.51UniProt (A0QSL5)
Pfam (PF00416)
Mycolicibacterium smegmatis30S ribosomal protein S13
13M
(N)
Small ribosomal subunit protein uS14Bpolymer606845.21UniProt (A0QSG2)
Pfam (PF00253)
Mycolicibacterium smegmatis30S ribosomal protein S14 type Z
14N
(O)
Small ribosomal subunit protein uS15polymer8810236.91UniProt (A0QVQ3)
Pfam (PF00312)
Mycolicibacterium smegmatis30S ribosomal protein S15
15O
(P)
Small ribosomal subunit protein bS16polymer9610837.61UniProt (A0QV37)
Pfam (PF00886)
Mycolicibacterium smegmatis30S ribosomal protein S16
16P
(Q)
Small ribosomal subunit protein uS17polymer9410680.51UniProt (A0QSE0)
Pfam (PF00366)
Mycolicibacterium smegmatis30S ribosomal protein S17
17Q
(R)
Small ribosomal subunit protein bS18Bpolymer657353.61UniProt (A0R7F7)
Pfam (PF01084)
Mycolicibacterium smegmatis30S ribosomal protein S18 2
18R
(T)
Small ribosomal subunit protein bS20polymer859424.91UniProt (A0R102)
Pfam (PF01649)
Mycolicibacterium smegmatis30S ribosomal protein S20
19S
(V)
Small ribosomal subunit protein uS2polymer22825576.51UniProt (A0QVB8)
Pfam (PF00318)
Mycolicibacterium smegmatis30S ribosomal protein S2
20T
(Y)
23S rRNApolymer3038985538.61Mycolicibacterium smegmatis
21U
(U)
5S rRNApolymer11838061.81GenBank (967054)Mycolicibacterium smegmatis
22V
(Z)
Large ribosomal subunit protein uL2polymer27530008.41UniProt (A0QSD4)
Pfam (PF00181)
Pfam (PF03947)
Mycolicibacterium smegmatis50S ribosomal protein L2
23W
(a)
Large ribosomal subunit protein uL3polymer21422621.91UniProt (A0QSD1)
Pfam (PF00297)
Mycolicibacterium smegmatis50S ribosomal protein L3
24X
(b)
Large ribosomal subunit protein uL4polymer20922346.31UniProt (A0QSD2)
Pfam (PF00573)
Mycolicibacterium smegmatis50S ribosomal protein L4
25Y
(c)
Large ribosomal subunit protein uL5polymer18220588.71UniProt (A0QSG1)
Pfam (PF00281)
Pfam (PF00673)
Mycolicibacterium smegmatis50S ribosomal protein L5
26Z
(d)
Large ribosomal subunit protein uL6polymer17619165.91UniProt (A0QSG4)
Pfam (PF00347)
Mycolicibacterium smegmatis50S ribosomal protein L6
27AA
(e)
Large ribosomal subunit protein uL11polymer13314109.21UniProt (A0QS45)
Pfam (PF03946)
Pfam (PF00298)
Mycolicibacterium smegmatis50S ribosomal protein L11
28BA
(f)
50S ribosomal protein L13polymer14616015.51UniProt (A0A653FEZ4)
Pfam (PF00572)
UniProt (by SIFTS) (A0QSP8)
Mycolicibacterium smegmatis
29CA
(g)
Large ribosomal subunit protein uL14polymer12213400.61UniProt (A0QSF9)
Pfam (PF00238)
Mycolicibacterium smegmatis50S ribosomal protein L14
30DA
(h)
50S ribosomal protein L15polymer14515384.01UniProt (A0A653FF82)
Pfam (PF00828)
UniProt (by SIFTS) (A0QSG8)
Mycolicibacterium smegmatis
31EA
(i)
Large ribosomal subunit protein uL16polymer13615498.91UniProt (A0QSD8)
Pfam (PF00252)
Mycolicibacterium smegmatis50S ribosomal protein L16
32FA
(j)
Large ribosomal subunit protein bL17polymer11813210.31UniProt (A0QSL9)
Pfam (PF01196)
Mycolicibacterium smegmatis50S ribosomal protein L17
33GA
(k)
Large ribosomal subunit protein uL18polymer12613580.51UniProt (A0QSG5)
Pfam (PF00861)
Mycolicibacterium smegmatis
34HA
(l)
Large ribosomal subunit protein bL19polymer11312892.81UniProt (A0QV42)
Pfam (PF01245)
Mycolicibacterium smegmatis50S ribosomal protein L19
35IA
(m)
Large ribosomal subunit protein bL20polymer12414035.21UniProt (A0QYU6)
Pfam (PF00453)
Mycolicibacterium smegmatis50S ribosomal protein L20
36JA
(n)
Large ribosomal subunit protein bL21polymer10010724.41UniProt (A0R151)
Pfam (PF00829)
Mycolicibacterium smegmatis50S ribosomal protein L21
37KA
(o)
50S ribosomal protein L22polymer11412408.21UniProt (O06115)
Pfam (PF00237)
UniProt (by SIFTS) (A0QSD6)
Mycolicibacterium smegmatis
38LA
(p)
Large ribosomal subunit protein uL23polymer9710748.41UniProt (A0QSD3)
Pfam (PF00276)
Mycolicibacterium smegmatis50S ribosomal protein L23
39MA
(q)
Large ribosomal subunit protein uL24polymer9710455.21UniProt (A0QSG0)
Pfam (PF00467)
Pfam (PF17136)
Mycolicibacterium smegmatis50S ribosomal protein L24
40NA
(r)
Large ribosomal subunit protein bL25polymer19220331.71UniProt (A0R3D2)
Pfam (PF01386)
Pfam (PF14693)
Mycolicibacterium smegmatisGeneral stress protein CTC
41OA
(s)
Large ribosomal subunit protein bL27polymer798322.51UniProt (A0R150)
Pfam (PF01016)
Mycolicibacterium smegmatis50S ribosomal protein L27
42PA
(t)
Large ribosomal subunit protein bL28polymer636759.81UniProt (A0QV03)
Pfam (PF00830)
Mycolicibacterium smegmatis
43QA
(u)
Large ribosomal subunit protein uL29polymer647590.61UniProt (A0QSD9)
Pfam (PF00831)
Mycolicibacterium smegmatis50S ribosomal protein L29
44RA
(v)
Large ribosomal subunit protein uL10polymer12613095.01UniProt (A0QS62)
Pfam (PF00466)
Mycolicibacterium smegmatis50S ribosomal protein L10
45SA
(w)
Large ribosomal subunit protein uL30polymer596761.81UniProt (A0QSG7)
Pfam (PF00327)
Mycolicibacterium smegmatis50S ribosomal protein L30
46TA
(x)
Large ribosomal subunit protein bL32polymer546050.11UniProt (A0R3I9)
Pfam (PF01783)
Mycolicibacterium smegmatis50S ribosomal protein L32
47UA
(y)
Large ribosomal subunit protein bL33Apolymer495833.81UniProt (A0QS39)
Pfam (PF00471)
Mycolicibacterium smegmatis50S ribosomal protein L33 1
48VA
(z)
50S ribosomal protein L34polymer465391.41UniProt (P0C562)
Pfam (PF00468)
UniProt (by SIFTS) (A0R7K0)
Mycolicibacterium smegmatis
49WA
(1)
Large ribosomal subunit protein bL35polymer637167.31UniProt (A0QYU7)
Pfam (PF01632)
Mycolicibacterium smegmatis50S ribosomal protein L35
50XA
(2)
50S ribosomal protein L36polymer374341.31UniProt (A0QSL4)
Pfam (PF00444)
Mycolicibacterium smegmatis
51YA
(4)
23S rRNA fragmentpolymer8126249.51GenBank (4586628)Mycolicibacterium smegmatis
52AB, AC, AD, AE, AF...
(A, E, Y, U, H...)
MAGNESIUM IONnon-polymer24.3624Chemie (MG)
53AZ, DZ, EJ, GJ, YY
(y, 2, N, R, t)
ZINC IONnon-polymer65.45Chemie (ZN)
Sequence modifications
q: 1 - 105 (UniProt: A0QSG0)
PDBExternal DatabaseDetails
-Ser 48deletion
-Ala 49deletion
-Asn 50deletion
-Glu 51deletion
-Arg 52deletion
-Gly 53deletion
-Ala 54deletion
-Ser 55deletion
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains51
Total formula weight2172586.9
Non-Polymers*Number of molecules629
Total formula weight15493.4
All*Total formula weight2188080.3
*Water molecules are not included.

239803

PDB entries from 2025-08-06

PDB statisticsPDBj update infoContact PDBjnumon