9AYR
Structure of a Ric1-Rgp1-Rab6 activation intermediate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Guanine nucleotide exchange factor subunit RIC1 | polymer | 1056 | 120278.8 | 1 | UniProt (P40395) Pfam (PF07064) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (brewer's yeast) | Protein RIC1,Ribosome control protein 1,Ric1p |
| 2 | B (B) | Guanine nucleotide exchange factor subunit RGP1 | polymer | 663 | 74621.5 | 1 | UniProt (P16664) Pfam (PF08737) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (brewer's yeast) | Reduced growth phenotype protein 1,Rgp1p |
| 3 | C (C) | GTP-binding protein YPT6 | polymer | 215 | 24444.6 | 1 | UniProt (Q99260) Pfam (PF00071) | Saccharomyces cerevisiae (brewer's yeast) |
Sequence modifications
A: 1 - 1056 (UniProt: P40395)
B: 1 - 663 (UniProt: P16664)
| PDB | External Database | Details |
|---|---|---|
| Unk 998 | Asp 998 | conflict |
| Unk 999 | Glu 999 | conflict |
| Unk 1000 | Glu 1000 | conflict |
| Unk 1001 | Leu 1001 | conflict |
| Unk 1002 | Met 1002 | conflict |
| Unk 1003 | Leu 1003 | conflict |
| Unk 1004 | Lys 1004 | conflict |
| Unk 1005 | Val 1005 | conflict |
| Unk 1006 | Leu 1006 | conflict |
| Unk 1007 | Glu 1007 | conflict |
| Unk 1008 | Leu 1008 | conflict |
| Unk 1009 | Leu 1009 | conflict |
| Unk 1010 | Val 1010 | conflict |
| Unk 1011 | Thr 1011 | conflict |
| Unk 1012 | Ser 1012 | conflict |
| Unk 1013 | Ala 1013 | conflict |
| Unk 1014 | Ala 1014 | conflict |
| Unk 1015 | Asn 1015 | conflict |
| Unk 1019 | Pro 1019 | conflict |
| Unk 1020 | Ile 1020 | conflict |
| Unk 1021 | Lys 1021 | conflict |
| Unk 1022 | Ala 1022 | conflict |
| Unk 1023 | Thr 1023 | conflict |
| Unk 1024 | Asp 1024 | conflict |
| Unk 1025 | Ser 1025 | conflict |
| Unk 1026 | Trp 1026 | conflict |
| Unk 1027 | Asp 1027 | conflict |
| Unk 1028 | Met 1028 | conflict |
| Unk 1029 | Cys 1029 | conflict |
| Unk 1030 | Phe 1030 | conflict |
| Unk 1031 | Gln 1031 | conflict |
| Unk 1032 | Leu 1032 | conflict |
| Unk 1033 | Ile 1033 | conflict |
| Unk 1034 | Arg 1034 | conflict |
| Unk 1035 | Leu 1035 | conflict |
| Unk 1036 | Leu 1036 | conflict |
| Unk 1037 | Lys 1037 | conflict |
| Unk 1038 | Glu 1038 | conflict |
| Unk 1039 | Leu 1039 | conflict |
| Unk 1047 | Leu 1047 | conflict |
| Unk 1048 | Val 1048 | conflict |
| Unk 1049 | Gln 1049 | conflict |
| Unk 1050 | Lys 1050 | conflict |
| Unk 1051 | Ala 1051 | conflict |
| Unk 1052 | Leu 1052 | conflict |
| Unk 1053 | Glu 1053 | conflict |
| Unk 1054 | Arg 1054 | conflict |
| Unk 1055 | Phe 1055 | conflict |
| Unk 1056 | Lys 1056 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Unk 379 | Lys 379 | conflict |
| Unk 380 | Arg 380 | conflict |
| Unk 381 | Val 381 | conflict |
| Unk 382 | Lys 382 | conflict |
| Unk 383 | Lys 383 | conflict |
| Unk 384 | Asn 384 | conflict |
| Unk 385 | Phe 385 | conflict |
| Unk 386 | Ile 386 | conflict |
| Unk 387 | Glu 387 | conflict |
| Unk 388 | Leu 388 | conflict |
| Unk 389 | Val 389 | conflict |
| Unk 390 | Glu 390 | conflict |
| Unk 398 | Asp 398 | conflict |
| Unk 399 | Ile 399 | conflict |
| Unk 400 | Asp 400 | conflict |
| Unk 401 | Glu 401 | conflict |
| Unk 402 | Leu 402 | conflict |
| Unk 403 | Ile 403 | conflict |
| Unk 404 | Asp 404 | conflict |
| Unk 405 | Leu 405 | conflict |
| Unk 406 | Gln 406 | conflict |
| Unk 407 | Met 407 | conflict |
| Unk 408 | Gly 408 | conflict |
| Unk 409 | Val 409 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 219344.9 | |
| All* | Total formula weight | 219344.9 |
