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9AXT

Non-translating S. pombe ribosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(AA)
18S ribosomal RNApolymer1842593528.81GenBank (NR_151432.1)Schizosaccharomyces pombe (fission yeast)
2B
(AD)
Small ribosomal subunit protein uS2Apolymer29231794.71UniProt (Q9Y7L8)
Pfam (PF00318)
Pfam (PF16122)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S0-A
3C
(AE)
Small ribosomal subunit protein eS1Bpolymer25228574.41UniProt (O94438)
Pfam (PF01015)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S1-B,S3aE-B
4D
(AF)
Small ribosomal subunit protein uS5polymer25327681.31UniProt (O74892)
Pfam (PF00333)
Pfam (PF03719)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S2
5E
(AG)
Small ribosomal subunit protein uS3polymer24927594.01UniProt (O60128)
Pfam (PF07650)
Pfam (PF00189)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S3
6F
(AH)
Small ribosomal subunit protein eS4Cpolymer26229736.01UniProt (Q9P4W9)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
Pfam (PF08071)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S4-C
7G
(AI)
Small ribosomal subunit protein uS7Apolymer20322257.71UniProt (O14277)
Pfam (PF00177)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S5-A
8H
(AJ)
Small ribosomal subunit protein eS6Bpolymer23927537.41UniProt (Q9C0Z7)
Pfam (PF01092)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S6-B
9I
(AK)
Small ribosomal subunit protein eS7polymer19521987.61UniProt (Q10101)
Pfam (PF01251)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S7
10J
(AL)
Small ribosomal subunit protein eS8Bpolymer20022614.01UniProt (Q9P7B2)
Pfam (PF01201)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S8-B
11K
(AM)
Small ribosomal subunit protein uS4Bpolymer19222291.01UniProt (O59675)
Pfam (PF00163)
Pfam (PF01479)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S9-B
12L
(AN)
Small ribosomal subunit protein eS10Bpolymer14716470.81UniProt (O13614)
Pfam (PF03501)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S10-B
13M
(AO)
Small ribosomal subunit protein uS17Apolymer15217535.51UniProt (P0CT73)
Pfam (PF16205)
Pfam (PF00366)
UniProt (by SIFTS) (P0CT74)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S11-A
14N
(AP)
Small ribosomal subunit protein eS12Apolymer14515632.71UniProt (O14062)
Pfam (PF01248)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S12-A
15O
(AQ)
Small ribosomal subunit protein uS15polymer15116986.01UniProt (P28189)
Pfam (PF08069)
Pfam (PF00312)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S13
16P
(AR)
Small ribosomal subunit protein uS11Bpolymer13914724.01UniProt (P0CT57)
Pfam (PF00411)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S14-B
17Q
(AS)
Small ribosomal subunit protein uS19Bpolymer15417667.61UniProt (Q9UTQ6)
Pfam (PF00203)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S15-B
18R
(AT)
Small ribosomal subunit protein uS9Apolymer14015424.11UniProt (P0CT64)
Pfam (PF00380)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S16-A
19S
(AU)
Small ribosomal subunit protein eS17Apolymer13115545.01UniProt (O42984)
Pfam (PF00833)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S17-A
20T
(AV)
Small ribosomal subunit protein uS13Bpolymer15217470.41UniProt (P0CT67)
Pfam (PF00416)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S18-B
21U
(AW)
Small ribosomal subunit protein eS19Apolymer14416178.41UniProt (P58234)
Pfam (PF01090)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S19-A,S16-A
22V
(Aa)
Small ribosomal subunit protein uS10polymer11813569.81UniProt (O74893)
Pfam (PF00338)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S20
23W
(Ab)
Small ribosomal subunit protein eS21polymer879627.71UniProt (P05764)
Pfam (PF01249)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S21,S28
24X
(Ac)
Small ribosomal subunit protein uS8Apolymer13014785.31UniProt (P0CT58)
Pfam (PF00410)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S22-A
25Y
(Ad)
Small ribosomal subunit protein uS12Apolymer14315691.41UniProt (P0CT75)
Pfam (PF00164)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S23-A
26Z
(Ae)
Small ribosomal subunit protein eS24Apolymer13415506.11UniProt (O13784)
Pfam (PF01282)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S24-A
27AA
(Af)
Small ribosomal subunit protein eS25Apolymer899979.81UniProt (P79009)
Pfam (PF03297)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S25-A,S31-A
28BA
(Ag)
Small ribosomal subunit protein eS26Bpolymer11913895.31UniProt (Q9UTG4)
Pfam (PF01283)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S26-B
29CA
(Ah)
Small ribosomal subunit protein eS27polymer839185.91UniProt (O74330)
Pfam (PF01667)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S27
30DA
(Ai)
Small ribosomal subunit protein eS28Apolymer687679.01UniProt (P0CT79)
Pfam (PF01200)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S28-A,S33
31EA
(Aj)
Small ribosomal subunit protein uS14polymer566672.71UniProt (O74329)
Pfam (PF00253)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S29
32FA
(Ak)
Small ribosomal subunit protein eS30Bpolymer616928.31UniProt (P0CT63)
Pfam (PF04758)
Schizosaccharomyces pombe (fission yeast)40S ribosomal protein S30-B
33GA
(B0)
Large ribosomal subunit protein eL42polymer10612239.61UniProt (Q9UTI8)
Pfam (PF00935)
Schizosaccharomyces pombe (fission yeast)
34HA
(B1)
Large ribosomal subunit protein eL43Apolymer9410444.31UniProt (Q9HGL8)
Pfam (PF01780)
Schizosaccharomyces pombe (fission yeast)L37A
35IA
(B2)
28S ribosomal RNApolymer34981129828.31GenBank (157310483)Schizosaccharomyces pombe (fission yeast)
36JA
(B3)
5S ribosomal RNApolymer24678518.91GenBank (157310380)Schizosaccharomyces pombe (fission yeast)
37KA
(B4)
5.8S ribosomal RNApolymer16552880.21GenBank (288694)Schizosaccharomyces pombe (fission yeast)
38LA
(BN)
Large ribosomal subunit protein uL2Cpolymer25327151.21UniProt (P0CT72)
Pfam (PF00181)
Pfam (PF03947)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L2-C,K37,K5,KD4
39MA
(BO)
Large ribosomal subunit protein uL3Apolymer38843889.81UniProt (P40372)
Pfam (PF00297)
Schizosaccharomyces pombe (fission yeast)
40NA
(BP)
Large ribosomal subunit protein uL4Apolymer36339839.11UniProt (P35679)
Pfam (PF00573)
Pfam (PF14374)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L4-A,L2
41OA
(BQ)
Large ribosomal subunit protein uL18Bpolymer29433538.91UniProt (O74306)
Pfam (PF17144)
Pfam (PF14204)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L5-B
42PA
(BR)
Large ribosomal subunit protein eL6polymer19521286.01UniProt (P79071)
Pfam (PF01159)
Schizosaccharomyces pombe (fission yeast)
43QA
(BS)
Large ribosomal subunit protein uL30Cpolymer25128780.51UniProt (O60143)
Pfam (PF08079)
Pfam (PF00327)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L7-C
44RA
(BT)
Large ribosomal subunit protein eL8polymer25928659.81UniProt (O13672)
Pfam (PF01248)
Schizosaccharomyces pombe (fission yeast)L4,L7A
45SA
(BU)
Large ribosomal subunit protein uL6Bpolymer18921413.91UniProt (O74905)
Pfam (PF00347)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L9-B
46TA
(BV)
Large ribosomal subunit protein uL16Apolymer22125421.61UniProt (Q09127)
Pfam (PF00252)
Schizosaccharomyces pombe (fission yeast)QM protein homolog,SpQM
47UA
(BW)
Large ribosomal subunit protein uL5Apolymer17419928.21UniProt (P0CT77)
Pfam (PF00281)
Pfam (PF00673)
Schizosaccharomyces pombe (fission yeast)
48VA
(BX)
Large ribosomal subunit protein eL13polymer20823578.11UniProt (O74175)
Pfam (PF01294)
Schizosaccharomyces pombe (fission yeast)
49WA
(BY)
Large ribosomal subunit protein eL14polymer13415241.11UniProt (O94238)
Pfam (PF00467)
Pfam (PF01929)
Schizosaccharomyces pombe (fission yeast)
50XA
(BZ)
Large ribosomal subunit protein eL15Bpolymer20123878.61UniProt (Q9US22)
Pfam (PF00827)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L15-B,SP-L12
51YA
(Ba)
Large ribosomal subunit protein uL13Apolymer19722050.11UniProt (O42848)
Pfam (PF00572)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L16-A
52ZA
(Bb)
Large ribosomal subunit protein uL22Apolymer18720854.11UniProt (O14339)
Pfam (PF00237)
Schizosaccharomyces pombe (fission yeast)
53AB
(Bc)
Large ribosomal subunit protein eL18Bpolymer18721235.01UniProt (Q8TFH1)
Pfam (PF17135)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L18-B
54BB
(Bd)
Large ribosomal subunit protein eL19Bpolymer19322813.81UniProt (O42699)
Pfam (PF01280)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L19-B
55CB
(Be)
Large ribosomal subunit protein eL20Apolymer17620642.31UniProt (P0CT68)
Pfam (PF01775)
Schizosaccharomyces pombe (fission yeast)YL17
56DB
(Bf)
Large ribosomal subunit protein eL21Bpolymer16018390.21UniProt (O42706)
Pfam (PF01157)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L21-B
57EB
(Bg)
Large ribosomal subunit protein eL22polymer11713344.41UniProt (Q09668)
Pfam (PF01776)
Schizosaccharomyces pombe (fission yeast)
58FB
(Bh)
Large ribosomal subunit protein uL14Bpolymer13914905.51UniProt (P0CT61)
Pfam (PF00238)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L23-B
59GB
(Bi)
Large ribosomal subunit protein eL24Bpolymer14916957.91UniProt (O74884)
Pfam (PF01246)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L24-B
60HB
(Bj)
Large ribosomal subunit protein uL23Apolymer14115870.71UniProt (Q10330)
Pfam (PF03939)
Pfam (PF00276)
Schizosaccharomyces pombe (fission yeast)
61IB
(Bk)
Large ribosomal subunit protein uL24polymer12614375.91UniProt (P78946)
Pfam (PF16906)
Pfam (PF00467)
Schizosaccharomyces pombe (fission yeast)
62JB
(Bl)
Large ribosomal subunit protein eL27Apolymer13615421.31UniProt (O14388)
Pfam (PF00467)
Pfam (PF01777)
Schizosaccharomyces pombe (fission yeast)
63KB
(Bm)
Large ribosomal subunit protein uL15Bpolymer14816723.51UniProt (P57728)
Pfam (PF00828)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L28-B
64LB
(Bn)
Large ribosomal subunit protein eL29polymer617224.21UniProt (Q92366)
Pfam (PF01779)
Schizosaccharomyces pombe (fission yeast)L43
65MB
(Bo)
Large ribosomal subunit protein eL30Apolymer10911610.61UniProt (P52808)
Pfam (PF01248)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L30-1,L32
66NB
(Bp)
Large ribosomal subunit protein eL31polymer11313290.51UniProt (Q9URX6)
Pfam (PF01198)
Schizosaccharomyces pombe (fission yeast)
67OB
(Bq)
Large ribosomal subunit protein eL32Apolymer12714491.11UniProt (P79015)
Pfam (PF01655)
Schizosaccharomyces pombe (fission yeast)
68PB
(Br)
Large ribosomal subunit protein eL33Apolymer10812212.31UniProt (Q9USX4)
Pfam (PF01247)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L33-A,L37A
69QB
(Bs)
Large ribosomal subunit protein eL34Bpolymer11112828.21UniProt (Q9URT8)
Pfam (PF01199)
Schizosaccharomyces pombe (fission yeast)60S ribosomal protein L34-2,60S ribosomal protein L34-B
70RB
(Bt)
Large ribosomal subunit protein uL29polymer12214333.91UniProt (O74904)
Pfam (PF00831)
Schizosaccharomyces pombe (fission yeast)
71SB
(Bu)
Large ribosomal subunit protein eL36Bpolymer9911287.41UniProt (O94658)
Pfam (PF01158)
Schizosaccharomyces pombe (fission yeast)
72TB
(Bv)
Large ribosomal subunit protein eL37Bpolymer9110112.81UniProt (P05733)
Pfam (PF01907)
Schizosaccharomyces pombe (fission yeast)L37-2,YL27
73UB
(Bw)
Large ribosomal subunit protein eL38Apolymer748511.11UniProt (Q9USR7)
Pfam (PF01781)
Schizosaccharomyces pombe (fission yeast)
74VB
(Bx)
Large ribosomal subunit protein eL39polymer516326.51UniProt (P05767)
Pfam (PF00832)
Schizosaccharomyces pombe (fission yeast)YL36
75WB
(By)
Large ribosomal subunit protein eL28polymer13414781.01UniProt (O14069)
Pfam (PF01778)
Schizosaccharomyces pombe (fission yeast)Probable 60S ribosomal protein L28e
76AC, BC, CC, XB, YB...
(B0, B1, Bv, Ag, Ah...)
ZINC IONnon-polymer65.46Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains75
Total formula weight3149865.0
Non-Polymers*Number of molecules6
Total formula weight392.5
All*Total formula weight3150257.5
*Water molecules are not included.

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PDB entries from 2025-06-18

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