9AR1
Structure of Epimerase Mth373 bound to uridine-5'-diphosphate-xylopyranose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | dTDP-glucose 4,6-dehydratase related protein | polymer | 356 | 41619.8 | 2 | UniProt (O26473) Pfam (PF01370) | Methanothermobacter thermautotrophicus str. Delta H | |
| 2 | C, I (A, B) | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | non-polymer | 663.4 | 2 | Chemie (NAD) | |||
| 3 | D, E, F, G, L (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 4 | H (A) | URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE | non-polymer | 536.3 | 1 | Chemie (UDX) PubChem (20776704) PubChem (1165) PubChem (23724459) PubChem (23724466) PubChem (46936197) PubChem (439179) PubChem (644105) PubChem (89195901) PubChem (19235) PubChem (439349) PubChem (101680907) PubChem (101642724) PubChem (102476153) PubChem (118705350) PubChem (9988606) PubChem (11272619) PubChem (11857306) PubChem (154572856) PubChem (172642273) PubChem (134727661) PubChem (157398751) PubChem (168006998) PubChem (171611961) | |||
| 5 | J (B) | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 1 | Chemie (UDP) PubChem (1158) PubChem (6031) PubChem (25323044) PubChem (25323048) PubChem (44298965) PubChem (53486216) PubChem (60098857) PubChem (57448939) PubChem (3084486) PubChem (91746160) PubChem (6101632) PubChem (92332560) PubChem (92332561) PubChem (92332562) PubChem (92332563) PubChem (93088131) PubChem (93630083) PubChem (6604175) PubChem (11811538) PubChem (12049241) | |||
| 6 | K (B) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) PubChem (753) | |||
| 7 | M, N (A, B) | water | water | 18.0 | 473 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 313 (UniProt: O26473)
| PDB | External Database | Details |
|---|---|---|
| Met -42 | - | expression tag |
| Gly -41 | - | expression tag |
| Ser -40 | - | expression tag |
| Ser -39 | - | expression tag |
| His -38 | - | expression tag |
| His -37 | - | expression tag |
| His -36 | - | expression tag |
| His -35 | - | expression tag |
| His -34 | - | expression tag |
| His -33 | - | expression tag |
| Ser -32 | - | expression tag |
| Ser -31 | - | expression tag |
| Gly -30 | - | expression tag |
| Leu -29 | - | expression tag |
| Val -28 | - | expression tag |
| Pro -27 | - | expression tag |
| Arg -26 | - | expression tag |
| Gly -25 | - | expression tag |
| Ser -24 | - | expression tag |
| His -23 | - | expression tag |
| Met -22 | - | expression tag |
| Leu -21 | - | expression tag |
| Glu -20 | - | expression tag |
| Asp -19 | - | expression tag |
| Pro -18 | - | expression tag |
| Ala -17 | - | expression tag |
| Ala -16 | - | expression tag |
| Asn -15 | - | expression tag |
| Lys -14 | - | expression tag |
| Ala -13 | - | expression tag |
| Arg -12 | - | expression tag |
| Lys -11 | - | expression tag |
| Glu -10 | - | expression tag |
| Ala -9 | - | expression tag |
| Glu -8 | - | expression tag |
| Leu -7 | - | expression tag |
| Ala -6 | - | expression tag |
| Ala -5 | - | expression tag |
| Ala -4 | - | expression tag |
| Thr -3 | - | expression tag |
| Ala -2 | - | expression tag |
| Glu -1 | - | expression tag |
| Gln 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 83239.7 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 2669.7 | |
| All* | Total formula weight | 85909.4 |
