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8ZUC

The Crystal structure of mol080 bound to the main protease (3CLpro/Mpro) of SARS-CoV-2

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
3C-like proteinasepolymer30133293.01UniProt (P0DTD1)
Pfam (PF05409)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2)3CL-PRO,3CLp,Main protease,Mpro,Non-structural protein 5,nsp5,SARS coronavirus main proteinase
2B
(B)
3C-like proteinasepolymer30133192.81UniProt (P0DTD1)
Pfam (PF05409)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2)3CL-PRO,3CLp,Main protease,Mpro,Non-structural protein 5,nsp5,SARS coronavirus main proteinase
3C, D
(A, B)
6-[[6-chloranyl-2-(3-methylbutyl)indazol-5-yl]amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]pyrimidine-2,4-dionenon-polymer587.02Chemie (A1D81)
4E, F
(A, B)
waterwater18.0505Chemie (HOH)
Sequence modifications
B: 1 - 301 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Gly 279Arg 3542conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight66485.8
Non-Polymers*Number of molecules2
Total formula weight1174.0
All*Total formula weight67659.8
*Water molecules are not included.

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PDB entries from 2025-12-17

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