Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8ZOC

Structure of the canthaxanthin mutant PSI-9VCPI supercomplex in Nannochloropsis oceanica

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(5)		VCPI-5polymer24425849.21Nannochloropsis oceanica strain IMET1
2B
(9)		VCPI-9polymer23224176.01Nannochloropsis oceanica strain IMET1
3C
(8)		VCPI-8polymer20021633.41Nannochloropsis oceanica strain IMET1
4D, H
(4, 7)		VCPI-4/7polymer20221611.32Nannochloropsis oceanica strain IMET1
5E
(3)		VCPI-3polymer22023046.81Nannochloropsis oceanica strain IMET1
6F
(6)		VCPI-6polymer25927655.71Nannochloropsis oceanica strain IMET1
7G
(2)		VCPI-2polymer22323865.61Nannochloropsis oceanica strain IMET1
8I
(1)		VCPI-1polymer20822652.11Nannochloropsis oceanica strain IMET1
9J
(a)		Photosystem I P700 chlorophyll a apoprotein A1polymer74582797.81UniProt (T1RJP7)Nannochloropsis oceanica strain IMET1PSI-A,PsaA
10K
(b)		Photosystem I P700 chlorophyll a apoprotein A2polymer73782865.01UniProt (T1RIQ1)Nannochloropsis oceanica strain IMET1PSI-B,PsaB
11L
(d)		Photosystem I reaction center subunit IIpolymer13615037.21UniProt (T1RIT2)Nannochloropsis oceanica strain IMET1
12M
(e)		Photosystem I reaction center subunit IVpolymer677668.71UniProt (T1RJT6)Nannochloropsis oceanica strain IMET1Photosystem I subunit IV
13N
(f)		Photosystem I reaction center subunit IIIpolymer18520813.11UniProt (T1RJ05)Nannochloropsis oceanica strain IMET1PSI-F
14O
(h)		PsaRpolymer12813958.51Nannochloropsis oceanica strain IMET1
15P
(i)		Photosystem I reaction center subunit VIIIpolymer455226.21UniProt (T1RJ07)Nannochloropsis oceanica strain IMET1PSI-I
16Q
(j)		Photosystem I reaction center subunit IXpolymer414762.61UniProt (T1RJW8)Nannochloropsis oceanica strain IMET1PSI-J
17R
(l)		PSI subunit Vpolymer17218695.61UniProt (T1RJZ1)Nannochloropsis oceanica strain IMET1
18S
(m)		PsaMpolymer303241.91UniProt (by SIFTS) (A0A8F5PPL2)Nannochloropsis oceanica strain IMET1
19T
(g)		PsaSpolymer554698.81Nannochloropsis oceanica strain IMET1
20U
(c)		Photosystem I iron-sulfur centerpolymer818763.11UniProt (T1RJY1)Nannochloropsis oceanica strain IMET19 kDa polypeptide,PSI-C,Photosystem I subunit VII,PsaC
21AD, AF, BD, DB, DD...
(6, 1, 8, 7, 3...)		(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOLnon-polymer600.934Chemie (XAT)
PubChem (24970201)
PubChem (46936684)
PubChem (53477762)
PubChem (51346155)
PubChem (92096)
PubChem (98049827)
PubChem (101341889)
PubChem (101341891)
PubChem (6852159)
PubChem (126456015)
PubChem (12358664)
PubChem (179930)
PubChem (155293357)
PubChem (162964874)
PubChem (448438)
PubChem (98049828)
PubChem (101341888)
PubChem (101341890)
PubChem (101341892)
PubChem (101341893)
PubChem (101341894)
PubChem (101341895)
PubChem (163187351)
PubChem (177696491)
PubChem (5282218)
PubChem (5315242)
PubChem (125183415)
PubChem (125183416)
PubChem (125183417)
PubChem (6384269)
PubChem (6442428)
PubChem (129888894)
PubChem (9851662)
PubChem (137331554)
PubChem (12358665)
PubChem (12358669)
PubChem (152743429)
PubChem (162964869)
PubChem (162964870)
PubChem (162964871)
PubChem (162964872)
PubChem (162964873)
PubChem (162964875)
PubChem (162964876)
PubChem (163186889)
PubChem (169544055)
PubChem (171036315)
PubChem (172817291)
22IE, LA, LC, PC, QA...
(7, 9, 3, 5, 1)		(1~{R},3~{S})-6-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{Z},17~{E})-16-(hydroxymethyl)-3,7,12-trimethyl-18-[(1~{S},4~{S},6~{R})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenylidene]-1,5,5-trimethyl-cyclohexane-1,3-diolnon-polymer616.97Chemie (A1L1G)
PubChem (102060377)
PubChem (163026410)
PubChem (163026411)
PubChem (163026412)
23AA, AB, AC, AE, AG...
(5, 9, 4, 2, a...)		CHLOROPHYLL Anon-polymer893.5188Chemie (CLA)
24KA, MF
(5, 1)		1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLnon-polymer795.12Chemie (SQD)
PubChem (25147486)
PubChem (25235342)
PubChem (42607399)
PubChem (159321)
PubChem (481096)
PubChem (134765349)
PubChem (102201395)
PubChem (5459390)
PubChem (9810997)
PubChem (9918745)
PubChem (10219110)
PubChem (10373133)
PubChem (14463145)
25BF, CD, GB, MA, SJ...
(1, 6, 8, 9, h)		[(2~{Z},4~{E},6~{E},8~{E},10~{E},12~{E},14~{E})-17-[(4~{S},6~{R})-4-acetyloxy-2,2,6-trimethyl-6-oxidanyl-cyclohexylidene]-6,11,15-trimethyl-2-[(~{E})-2-[(1~{S},4~{S},6~{R})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]ethenyl]heptadeca-2,4,6,8,10,12,14,16-octaenyl] octanoatenon-polymer785.16Chemie (A1L1F)
PubChem (162935582)
PubChem (162935583)
26PA
(9)		beta,beta-carotene-4,4'-dionenon-polymer564.81Chemie (45D)
27BB, FH, GH, JJ, RA
(9, a, b)		1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLEnon-polymer723.05Chemie (LHG)
PubChem (46936292)
PubChem (65144)
PubChem (73416066)
PubChem (13305396)
PubChem (446440)
PubChem (9547104)
PubChem (11846227)
PubChem (138986743)
28JC, KJ, RB
(4, b, 8)		DIGALACTOSYL DIACYL GLYCEROL (DGDG)non-polymer949.33Chemie (DGD)
PubChem (24865462)
PubChem (50904896)
PubChem (24865463)
PubChem (46936671)
PubChem (53480668)
PubChem (447899)
PubChem (4629344)
PubChem (15991538)
PubChem (154573294)
PubChem (448441)
PubChem (171123158)
PubChem (134746152)
PubChem (140529801)
29GE, NH, ZJ
(2, a, j)		1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDEnon-polymer787.23Chemie (LMG)
30DH, DJ
(a, b)		PHYLLOQUINONEnon-polymer450.72Chemie (PQN)
PubChem (21896458)
PubChem (57138572)
PubChem (5280483)
PubChem (5284607)
PubChem (7048754)
PubChem (133612476)
PubChem (4812)
PubChem (92436622)
PubChem (93233163)
PubChem (93971968)
PubChem (5315258)
PubChem (7048753)
PubChem (7048755)
PubChem (9846607)
PubChem (162999945)
31AK, EJ, EK, FJ, FK...
(l, b, m, a, f...)		BETA-CAROTENEnon-polymer536.919Chemie (BCR)
PubChem (21672398)
PubChem (46783370)
PubChem (46846294)
PubChem (176490061)
PubChem (177696266)
PubChem (54603957)
PubChem (54612003)
PubChem (5280489)
PubChem (92863345)
PubChem (124919640)
PubChem (573)
PubChem (86765360)
PubChem (91827292)
PubChem (146673260)
PubChem (152743364)
PubChem (160505766)
PubChem (92863346)
PubChem (92863347)
PubChem (92863348)
PubChem (100990628)
PubChem (101525094)
PubChem (101525095)
PubChem (5315709)
PubChem (5353436)
PubChem (5356616)
PubChem (124919639)
PubChem (5927371)
PubChem (6477957)
PubChem (129651951)
PubChem (132274419)
PubChem (9828626)
PubChem (10256668)
PubChem (12305639)
PubChem (12305640)
PubChem (12305642)
PubChem (12305644)
PubChem (12305647)
PubChem (12305652)
PubChem (145925599)
PubChem (159562859)
PubChem (172654026)
PubChem (172878405)
PubChem (173398668)
32GK, HK, LH
(c, a)		IRON/SULFUR CLUSTERnon-polymer351.63Chemie (SF4)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains21
Total formula weight480629.8
Non-Polymers*Number of molecules273
Total formula weight220570.4
All*Total formula weight701200.2
*Water molecules are not included.

251174

PDB entries from 2026-03-25

PDB statisticsPDBj update infoContact PDBjnumon