8ZLY
Crystal structure of Streptococcus pneumoniae pyruvate kinase in complex with oxalate and fructose 1,6-bisphosphate and UDP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | Pyruvate kinase | polymer | 521 | 56993.6 | 8 | UniProt (Q8DQ84) In PDB | Streptococcus pneumoniae R6 | |
2 | D, E, A, F, B... | 1,6-di-O-phosphono-beta-D-fructofuranose | non-polymer | 340.1 | 8 | Chemie (FBP) | |||
3 | D, E, A, F, B... | MAGNESIUM ION | non-polymer | 24.3 | 15 | Chemie (MG) | |||
4 | D, E, A, F, B... | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 7 | Chemie (UDP) | |||
5 | H, D, E, A, F... | POTASSIUM ION | non-polymer | 39.1 | 8 | Chemie (K) | |||
6 | H, D, E, A, F... | OXALATE ION | non-polymer | 88.0 | 8 | Chemie (OXL) | |||
7 | water | water | 18.0 | 3849 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H: 1 - 501 (UniProt: Q8DQ84)
PDB | External Database | Details |
---|---|---|
Met -19 | - | initiating methionine |
Gly -18 | - | expression tag |
Ser -17 | - | expression tag |
Ser -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | expression tag |
Ser -8 | - | expression tag |
Gly -7 | - | expression tag |
Leu -6 | - | expression tag |
Val -5 | - | expression tag |
Pro -4 | - | expression tag |
Arg -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 455948.7 | |
Non-Polymers* | Number of molecules | 46 |
Total formula weight | 6931.6 | |
All* | Total formula weight | 462880.3 |