8Z7N
Structure of HIV-1 CH119 SOSIP.664 trimer in complex with CD4 molecules
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D, G | Envelope glycoprotein gp160 | polymer | 518 | 58258.1 | 3 | UniProt (A1EAH4) Pfam (PF00516) In PDB | Human immunodeficiency virus 1 | Env polyprotein |
2 | B, E, H | Envelope glycoprotein gp160 | polymer | 164 | 18285.7 | 3 | UniProt (A1EAH4) Pfam (PF00517) In PDB | Human immunodeficiency virus 1 | Env polyprotein |
3 | C, F, I | T-cell surface glycoprotein CD4 | polymer | 401 | 44675.3 | 3 | UniProt (P01730) Pfam (PF00047) Pfam (PF05790) Pfam (PF09191) In PDB | Homo sapiens (human) | T-cell surface antigen T4/Leu-3 |
4 | H, A, B, D, E... | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 18 | Chemie (NAG) |
Sequence modifications
A, D, G: 36 - 514 (UniProt: A1EAH4)
B, E, H: 519 - 671 (UniProt: A1EAH4)
C, F, I: -22 - 369 (UniProt: P01730)
PDB | External Database | Details |
---|---|---|
Met 1 | - | initiating methionine |
Asp 2 | - | expression tag |
Ala 3 | - | expression tag |
Met 4 | - | expression tag |
Lys 5 | - | expression tag |
Arg 6 | - | expression tag |
Gly 7 | - | expression tag |
Leu 8 | - | expression tag |
Cys 9 | - | expression tag |
Cys 10 | - | expression tag |
Val 11 | - | expression tag |
Leu 12 | - | expression tag |
Leu 13 | - | expression tag |
Leu 14 | - | expression tag |
Cys 15 | - | expression tag |
Gly 16 | - | expression tag |
Ala 17 | - | expression tag |
Val 18 | - | expression tag |
Phe 19 | - | expression tag |
Val 20 | - | expression tag |
Ser 21 | - | expression tag |
Pro 22 | - | expression tag |
Ser 23 | - | expression tag |
Gln 24 | - | expression tag |
Glu 25 | - | expression tag |
Ile 26 | - | expression tag |
His 27 | - | expression tag |
Ala 28 | - | expression tag |
Arg 29 | - | expression tag |
Phe 30 | - | expression tag |
Arg 31 | - | expression tag |
Arg 32 | - | expression tag |
Gly 33 | - | expression tag |
Ala 34 | - | expression tag |
Arg 35 | - | expression tag |
Cys 507 | Ala 499 | engineered mutation |
Arg 515 | - | expression tag |
Arg 516 | - | expression tag |
Arg 517 | - | expression tag |
Arg 518 | - | expression tag |
Arg 519 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Pro 566 | Ile 557 | engineered mutation |
Cys 612 | Thr 603 | engineered mutation |
Gly 672 | - | expression tag |
Gly 673 | - | expression tag |
Gly 674 | - | expression tag |
Gly 675 | - | expression tag |
Gly 676 | - | expression tag |
His 677 | - | expression tag |
His 678 | - | expression tag |
His 679 | - | expression tag |
His 680 | - | expression tag |
His 681 | - | expression tag |
His 682 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly 370 | - | expression tag |
Ser 371 | - | expression tag |
Gly 372 | - | expression tag |
His 373 | - | expression tag |
His 374 | - | expression tag |
His 375 | - | expression tag |
His 376 | - | expression tag |
His 377 | - | expression tag |
His 378 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 9 |
Total formula weight | 363657.4 | |
Non-Polymers* | Number of molecules | 18 |
Total formula weight | 3981.7 | |
All* | Total formula weight | 367639.2 |