8Z27
The structure of TGEV RBD and dog APN complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (a) | Spike glycoprotein | polymer | 175 | 19363.8 | 1 | UniProt (Q0PKZ5) Pfam (PF01600) | TGEV virulent Purdue | S glycoprotein,E2,Peplomer protein |
| 2 | B (b) | Aminopeptidase N | polymer | 943 | 107003.0 | 1 | UniProt (P79143) Pfam (PF17900) Pfam (PF01433) Pfam (PF11838) | Canis lupus familiaris (dog) | AP-N,cAPN,Alanyl aminopeptidase,Aminopeptidase M,AP-M,Microsomal aminopeptidase |
| 3 | C (A) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 4 | D, E, G (B, C, E) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
| 5 | F (D) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
| 6 | H (a) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
b: 36 - 975 (UniProt: P79143)
| PDB | External Database | Details |
|---|---|---|
| Gly 976 | - | expression tag |
| Gly 977 | - | expression tag |
| Ser 978 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 126366.8 | |
| Branched | Number of molecules | 5 |
| Total formula weight | 2592.4 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 221.2 | |
| All* | Total formula weight | 129180.4 |
