8YZI
The structure of PDCoV RBD and dog APN complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (C, A) | Spike protein | polymer | 132 | 14652.6 | 2 | UniProt (A0A0E3N634) Pfam (PF01600) UniProt (by SIFTS) (A0A0E3U229) | Porcine deltacoronavirus | |
| 2 | C, D (B, D) | Aminopeptidase N | polymer | 940 | 106801.8 | 2 | UniProt (P79143) Pfam (PF17900) Pfam (PF01433) Pfam (PF11838) | Canis lupus familiaris (dog) | AP-N,cAPN,Alanyl aminopeptidase,Aminopeptidase M,AP-M,Microsomal aminopeptidase |
| 3 | E, F, H, I, J... (E, F, H, I, J...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 9 | In PDB GlyTouCan (G42666HT) | |||
| 4 | G (G) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 383.3 | 1 | In PDB GlyTouCan (G90333CG) | |||
| 5 | O, P, Q, R, S... (C, A, B, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 7 | Chemie (NAG) | |||
| 6 | T, W (B, D) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 242908.7 | |
| Branched | Number of molecules | 10 |
| Total formula weight | 4203.0 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1679.3 | |
| All* | Total formula weight | 248790.9 |
