8YY6
Structure of a murine monoclonal antibody Fab5 targeting Epstein-Barr virus gB
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D, G (D, E, G) | Fab5 H chain | polymer | 224 | 24199.9 | 3 | Homo sapiens | ||
| 2 | B, E, H (F, H, I) | Fab5 L chain | polymer | 213 | 23261.8 | 3 | Homo sapiens | ||
| 3 | C, F, I (A, B, C) | BALF4 | polymer | 667 | 75215.1 | 3 | UniProt (R4R670) | human gammaherpesvirus 4 (Epstein-Barr virus) | gB, Glycoprotein gp110 |
| 4 | J, K, L (A, B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) |
Sequence modifications
A, B, C: 133 - 1238 (UniProt: R4R670)
| PDB | External Database | Details |
|---|---|---|
| His 237 | Trp 112 | conflict |
| Arg 238 | Tyr 113 | conflict |
| Arg 318 | Trp 193 | conflict |
| Val 319 | Leu 194 | conflict |
| Glu 320 | Ile 195 | conflict |
| Ala 321 | Trp 196 | conflict |
| His 1239 | - | expression tag |
| His 1240 | - | expression tag |
| His 1241 | - | expression tag |
| His 1242 | - | expression tag |
| His 1243 | - | expression tag |
| His 1244 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 368030.5 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 663.6 | |
| All* | Total formula weight | 368694.1 |
