8YWE
Local refinement of SARS-CoV-2 Omicron BA.2.86 S complexed with Abs G7-Fc
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Spike protein S1 | polymer | 222 | 25294.7 | 1 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus (2019-nCoV SARS-CoV-2) | |
| 2 | B (B) | GW01 scFv | polymer | 251 | 26186.5 | 1 | Homo sapiens | ||
| 3 | C (C) | 7F3 scFv | polymer | 260 | 27871.9 | 1 | Homo sapiens |
Sequence modifications
A: 319 - 541 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Val 332 | Ile 332 | conflict |
| His 339 | Gly 339 | variant |
| Thr 356 | Lys 356 | conflict |
| Phe 371 | Ser 371 | variant |
| Pro 373 | Ser 373 | variant |
| Phe 375 | Ser 375 | variant |
| Ala 376 | Thr 376 | variant |
| Lys 403 | Arg 403 | conflict |
| Asn 405 | Asp 405 | variant |
| Ser 408 | Arg 408 | variant |
| Asn 417 | Lys 417 | variant |
| Lys 440 | Asn 440 | variant |
| His 445 | Val 445 | conflict |
| Ser 446 | Gly 446 | variant |
| Asp 450 | Asn 450 | conflict |
| Trp 452 | Leu 452 | conflict |
| Lys 460 | Asn 460 | variant |
| Asn 477 | Ser 477 | variant |
| Lys 478 | Thr 478 | variant |
| Lys 481 | Asn 481 | conflict |
| - | Val 483 | deletion |
| Lys 484 | Glu 484 | variant |
| Pro 486 | Phe 486 | variant |
| Arg 498 | Gln 498 | variant |
| Tyr 501 | Asn 501 | variant |
| His 505 | Tyr 505 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 79353.1 | |
| All* | Total formula weight | 79353.1 |
