8YVS
Crystal structure of GH65 alpha-1,2-glucosidase from Flavobacterium johnsoniae in complex with castanospermine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Candidate alpha glycoside phosphorylase Glycoside hydrolase family 65 | polymer | 678 | 76489.2 | 3 | UniProt (A5FBJ5) Pfam (PF03636) Pfam (PF03632) | Flavobacterium johnsoniae UW101 | alpha-1,2-glucosidase |
| 2 | D, E, J, K, M... (A, B, C) | CASTANOSPERMINE | non-polymer | 189.2 | 6 | Chemie (CTS) | |||
| 3 | F, G, H, I, L... (A, B, C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 8 | Chemie (EDO) | |||
| 4 | R, S, T (A, B, C) | water | water | 18.0 | 1204 | Chemie (HOH) |
Sequence modifications
A, B, C: 24 - 681 (UniProt: A5FBJ5)
| PDB | External Database | Details |
|---|---|---|
| Met 4 | - | initiating methionine |
| Gly 5 | - | expression tag |
| Ser 6 | - | expression tag |
| Ser 7 | - | expression tag |
| His 8 | - | expression tag |
| His 9 | - | expression tag |
| His 10 | - | expression tag |
| His 11 | - | expression tag |
| His 12 | - | expression tag |
| His 13 | - | expression tag |
| Ser 14 | - | expression tag |
| Ser 15 | - | expression tag |
| Gly 16 | - | expression tag |
| Leu 17 | - | expression tag |
| Val 18 | - | expression tag |
| Pro 19 | - | expression tag |
| Arg 20 | - | expression tag |
| Gly 21 | - | expression tag |
| Ser 22 | - | expression tag |
| His 23 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 229467.7 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 1631.8 | |
| All* | Total formula weight | 231099.5 |






