8YSO
Crystal structure of the Deinococcus wulumuqiensis CD-NTase DwCdnB Ear-cut mutant in complex with ATP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Nucleotidyltransferase | polymer | 334 | 37251.8 | 1 | UniProt (A0A345ILN6) Pfam (PF21654) | Deinococcus wulumuqiensis | DwCdnB |
| 2 | B, C (A) | ADENOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 2 | Chemie (ATP) | |||
| 3 | D, E (A) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 4 | F (A) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 5 | G (A) | water | water | 18.0 | 315 | Chemie (HOH) |
Sequence modifications
A: 1 - 334 (UniProt: A0A345ILN6)
| PDB | External Database | Details |
|---|---|---|
| - | Arg 224 | deletion |
| - | Thr 225 | deletion |
| - | Asp 226 | deletion |
| - | Pro 227 | deletion |
| - | Val 228 | deletion |
| - | Ser 229 | deletion |
| - | Gln 230 | deletion |
| Gly 224 | Asn 231 | conflict |
| Ser 225 | Val 232 | conflict |
| Gly 226 | Thr 233 | conflict |
| - | Thr 254 | deletion |
| - | Trp 255 | deletion |
| - | Asp 256 | deletion |
| - | Ser 257 | deletion |
| - | Lys 258 | deletion |
| - | Asp 259 | deletion |
| - | Gln 260 | deletion |
| Gly 247 | Arg 261 | conflict |
| Gly 249 | Tyr 263 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 37251.8 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 1157.9 | |
| All* | Total formula weight | 38409.7 |
